Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 HLA-A-201ENST00000376802 1334 ntBASIC13.73□□□□□ -0.21
DUX3Q96PT4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 AL022342.1-201ENST00000400363 863 ntBASIC13.73□□□□□ -0.21
DUX3Q96PT4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 AC011467.2-201ENST00000598425 242 ntBASIC13.73□□□□□ -0.21
DUX3Q96PT4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 LTB4R2-202ENST00000528054 3092 ntBASIC13.73□□□□□ -0.21
DUX3Q96PT4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 KRT8P47-201ENST00000604727 1398 ntBASIC13.72□□□□□ -0.21
DUX3Q96PT4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 AC009113.1-201ENST00000570267 2443 ntBASIC13.72□□□□□ -0.21
DUX3Q96PT4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 AC093677.2-201ENST00000600169 1863 ntBASIC13.72□□□□□ -0.21
DUX3Q96PT4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 AL662844.1-201ENST00000546340 181 ntBASIC13.72□□□□□ -0.21
DUX3Q96PT4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 AC120114.3-201ENST00000611923 658 ntBASIC13.72□□□□□ -0.21
DUX3Q96PT4 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.72□□□□□ -0.21
DUX3Q96PT4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.72□□□□□ -0.21
DUX3Q96PT4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms