Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 AC010240.3-201ENST00000607688 395 ntBASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 AC009949.1-201ENST00000623048 1830 ntBASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 AC009947.2-201ENST00000444014 672 ntBASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 ECEL1P2-202ENST00000465689 757 ntBASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC47A1Q96FL8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SLC47A1Q96FL8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
SLC47A1Q96FL8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.64■□□□□ 0.26
SLC47A1Q96FL8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
SLC47A1Q96FL8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 AC093827.2-201ENST00000512654 315 ntBASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 NEK4P2-201ENST00000580004 1012 ntBASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 FAM87A-204ENST00000613235 858 ntBASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SLC47A1Q96FL8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 LINC00167-201ENST00000530583 1419 ntBASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms