Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 MIR718-201ENST00000390190 70 ntBASIC16.97■□□□□ 0.31
VPS33AQ96AX1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 TSPY15P-201ENST00000457163 923 ntBASIC16.97■□□□□ 0.31
VPS33AQ96AX1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 AC106886.4-201ENST00000623557 2502 ntBASIC16.97■□□□□ 0.31
VPS33AQ96AX1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS33AQ96AX1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 AC128688.1-201ENST00000487626 519 ntBASIC16.96■□□□□ 0.31
VPS33AQ96AX1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 FAM87A-204ENST00000613235 858 ntBASIC16.96■□□□□ 0.31
VPS33AQ96AX1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 KRT8P47-201ENST00000604727 1398 ntBASIC16.96■□□□□ 0.31
VPS33AQ96AX1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VPS33AQ96AX1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
VPS33AQ96AX1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
VPS33AQ96AX1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VPS33AQ96AX1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VPS33AQ96AX1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
VPS33AQ96AX1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VPS33AQ96AX1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.96■□□□□ 0.3
VPS33AQ96AX1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.96■□□□□ 0.3
VPS33AQ96AX1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
VPS33AQ96AX1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.95■□□□□ 0.3
VPS33AQ96AX1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS33AQ96AX1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms