Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.87■□□□□ 0.13
CPNE4Q96A23 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE4Q96A23 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.87■□□□□ 0.13
CPNE4Q96A23 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CPNE4Q96A23 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 AC103564.2-201ENST00000432853 1299 ntBASIC15.86■□□□□ 0.13
CPNE4Q96A23 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.86■□□□□ 0.13
CPNE4Q96A23 AL732292.2-201ENST00000609649 430 ntBASIC15.86■□□□□ 0.13
CPNE4Q96A23 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CPNE4Q96A23 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE4Q96A23 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 AL139384.1-201ENST00000612143 3047 ntBASIC15.85■□□□□ 0.13
CPNE4Q96A23 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 IFNL4P1-201ENST00000607083 540 ntBASIC15.85■□□□□ 0.13
CPNE4Q96A23 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE4Q96A23 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CPNE4Q96A23 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CPNE4Q96A23 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE4Q96A23 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE4Q96A23 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CPNE4Q96A23 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CPNE4Q96A23 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CPNE4Q96A23 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CPNE4Q96A23 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.84■□□□□ 0.13
CPNE4Q96A23 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.84■□□□□ 0.13
CPNE4Q96A23 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE4Q96A23 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE4Q96A23 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms