Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 SPDYE15P-201ENST00000424157 909 ntBASIC19.9■□□□□ 0.78
SMARCE1Q969G3 HLA-F-220ENST00000434407 884 ntBASIC19.9■□□□□ 0.78
SMARCE1Q969G3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.9■□□□□ 0.78
SMARCE1Q969G3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.9■□□□□ 0.78
SMARCE1Q969G3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SMARCE1Q969G3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SMARCE1Q969G3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
SMARCE1Q969G3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 TSPY12P-201ENST00000421279 868 ntBASIC19.89■□□□□ 0.77
SMARCE1Q969G3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCE1Q969G3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.88■□□□□ 0.77
SMARCE1Q969G3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCE1Q969G3 AC011270.2-201ENST00000624293 2550 ntBASIC19.88■□□□□ 0.77
SMARCE1Q969G3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 AD000864.1-201ENST00000624076 2295 ntBASIC19.87■□□□□ 0.77
SMARCE1Q969G3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 STARP1-201ENST00000397973 869 ntBASIC19.87■□□□□ 0.77
SMARCE1Q969G3 FAM8A6P-201ENST00000407496 1135 ntBASIC19.87■□□□□ 0.77
SMARCE1Q969G3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 AC112698.1-201ENST00000510299 916 ntBASIC19.87■□□□□ 0.77
SMARCE1Q969G3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.87■□□□□ 0.77
SMARCE1Q969G3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 AC011558.1-201ENST00000623459 338 ntBASIC19.87■□□□□ 0.77
SMARCE1Q969G3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 AC008894.3-201ENST00000624324 3103 ntBASIC19.87■□□□□ 0.77
SMARCE1Q969G3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
SMARCE1Q969G3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SMARCE1Q969G3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.86■□□□□ 0.77
SMARCE1Q969G3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.86■□□□□ 0.77
SMARCE1Q969G3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.86■□□□□ 0.77
SMARCE1Q969G3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.86■□□□□ 0.77
SMARCE1Q969G3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms