Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLL1Q8TB92 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGCLL1Q8TB92 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.3■□□□□ 0.36
HMGCLL1Q8TB92 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGCLL1Q8TB92 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 AC096633.1-201ENST00000422446 749 ntBASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 AC012615.1-201ENST00000565797 1299 ntBASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 AP005901.3-202ENST00000581653 237 ntBASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 AC005336.2-201ENST00000593183 939 ntBASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 AL138831.2-201ENST00000606564 490 ntBASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 AC116407.2-201ENST00000613639 860 ntBASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 AC125634.1-201ENST00000438758 1403 ntBASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGCLL1Q8TB92 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 IGHV3-47-201ENST00000425060 335 ntBASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 LINC00265-3P-201ENST00000447588 903 ntBASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLL1Q8TB92 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLL1Q8TB92 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms