Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.62■■□□□ 1.05
RTL9Q8NET4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.62■■□□□ 1.05
RTL9Q8NET4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.62■■□□□ 1.05
RTL9Q8NET4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.62■■□□□ 1.05
RTL9Q8NET4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RTL9Q8NET4 AC009113.1-201ENST00000570267 2443 ntBASIC21.62■■□□□ 1.05
RTL9Q8NET4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTL9Q8NET4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTL9Q8NET4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTL9Q8NET4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.62■■□□□ 1.05
RTL9Q8NET4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTL9Q8NET4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTL9Q8NET4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.62■■□□□ 1.05
RTL9Q8NET4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTL9Q8NET4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTL9Q8NET4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTL9Q8NET4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.62■■□□□ 1.05
RTL9Q8NET4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTL9Q8NET4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 VN2R19P-201ENST00000442399 1052 ntBASIC21.61■■□□□ 1.05
RTL9Q8NET4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 LINC02084-201ENST00000606069 1096 ntBASIC21.61■■□□□ 1.05
RTL9Q8NET4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 REXO1L11P-201ENST00000620964 1927 ntBASIC21.61■■□□□ 1.05
RTL9Q8NET4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 AC097637.2-201ENST00000624096 1997 ntBASIC21.61■■□□□ 1.05
RTL9Q8NET4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTL9Q8NET4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.61■■□□□ 1.05
RTL9Q8NET4 AC010654.1-201ENST00000615722 808 ntBASIC21.61■■□□□ 1.05
RTL9Q8NET4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.6■■□□□ 1.05
RTL9Q8NET4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.6■■□□□ 1.05
RTL9Q8NET4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTL9Q8NET4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTL9Q8NET4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTL9Q8NET4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTL9Q8NET4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTL9Q8NET4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTL9Q8NET4 AC002310.6-201ENST00000624451 1377 ntBASIC21.6■■□□□ 1.05
RTL9Q8NET4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RTL9Q8NET4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTL9Q8NET4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTL9Q8NET4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTL9Q8NET4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTL9Q8NET4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTL9Q8NET4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RTL9Q8NET4 IGLL3P-201ENST00000412472 434 ntBASIC21.6■■□□□ 1.05
RTL9Q8NET4 MCCD1P2-201ENST00000423228 335 ntBASIC21.6■■□□□ 1.05
RTL9Q8NET4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTL9Q8NET4 AP006288.1-201ENST00000446065 395 ntBASIC21.6■■□□□ 1.05
RTL9Q8NET4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.6■■□□□ 1.05
RTL9Q8NET4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTL9Q8NET4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTL9Q8NET4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTL9Q8NET4 BICD1-207ENST00000551848 1962 ntBASIC21.59■■□□□ 1.05
RTL9Q8NET4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTL9Q8NET4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTL9Q8NET4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTL9Q8NET4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTL9Q8NET4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTL9Q8NET4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTL9Q8NET4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTL9Q8NET4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.59■■□□□ 1.05
RTL9Q8NET4 AC079781.4-201ENST00000641908 219 ntBASIC21.59■■□□□ 1.05
RTL9Q8NET4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms