Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 TOB2P1-201ENST00000469761 992 ntBASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 AC122714.2-201ENST00000502787 707 ntBASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 PP12613-201ENST00000424958 2230 ntBASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TMEM35BQ8NCS4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 FAM220CP-201ENST00000395253 831 ntBASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 LINC00265-3P-201ENST00000447588 903 ntBASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35BQ8NCS4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 KRT17P6-201ENST00000453795 1220 ntBASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 MIR3180-1-201ENST00000580374 94 ntBASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 MIR3180-3-201ENST00000584616 94 ntBASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 NPAP1P7-201ENST00000613027 823 ntBASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35BQ8NCS4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms