Protein–RNA interactions for Protein: Q8NCQ3

LINC00301, Putative uncharacterized protein encoded by LINC00301, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00301Q8NCQ3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LINC00301Q8NCQ3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 AL645929.1-201ENST00000420084 975 ntBASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 AL845331.1-201ENST00000424978 1190 ntBASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 AC007967.3-201ENST00000434308 558 ntBASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 DUX4L26-201ENST00000489078 1255 ntBASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 RN7SL850P-201ENST00000579959 291 ntBASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 AC019129.2-201ENST00000609837 1235 ntBASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.04■□□□□ 0.8
LINC00301Q8NCQ3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 AC084018.2-201ENST00000613093 2607 ntBASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 SLC25A1P3-201ENST00000395415 828 ntBASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00301Q8NCQ3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 AC125634.1-201ENST00000438758 1403 ntBASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 AC060834.1-201ENST00000443027 2032 ntBASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 TSPY22P-201ENST00000427496 604 ntBASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 GUSBP12-201ENST00000513727 720 ntBASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LINC00301Q8NCQ3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms