Protein–RNA interactions for Protein: Q8N9B4

ANKRD42, Ankyrin repeat domain-containing protein 42, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42Q8N9B4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 LINC01451-201ENST00000623792 534 ntBASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.83■□□□□ 0.44
ANKRD42Q8N9B4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 AL355802.2-201ENST00000402069 882 ntBASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 AC005915.1-201ENST00000624912 2018 ntBASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ANKRD42Q8N9B4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
ANKRD42Q8N9B4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 NFIC-211ENST00000641145 8399 ntBASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 AC011270.2-201ENST00000624293 2550 ntBASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ANKRD42Q8N9B4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms