Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 AC113404.2-201ENST00000507884 177 ntBASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.45■□□□□ 0.38
CCNYL1Q8N7R7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 ECEL1P3-201ENST00000427961 737 ntBASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.44■□□□□ 0.38
CCNYL1Q8N7R7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 KRT8P47-201ENST00000604727 1398 ntBASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 KRT18P65-201ENST00000439811 1286 ntBASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 GCSHP2-201ENST00000560971 527 ntBASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 AC024563.2-201ENST00000603282 481 ntBASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNYL1Q8N7R7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 LINC01568-207ENST00000641790 1380 ntBASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNYL1Q8N7R7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms