Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 AC132938.5-201ENST00000624980 1813 ntBASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 FGFR3P6-201ENST00000457012 610 ntBASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAM1L1Q8N609 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 AC079776.2-201ENST00000641154 1609 ntBASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 AL121912.1-201ENST00000603683 238 ntBASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAM1L1Q8N609 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 HTR7P1-202ENST00000624664 4411 ntBASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 SIGLEC16-201ENST00000599858 1437 ntBASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 KLF4P1-201ENST00000412782 1185 ntBASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 SPDYE21P-201ENST00000413323 827 ntBASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 SCARNA2-201ENST00000458748 420 ntBASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 STK19B-204ENST00000512515 211 ntBASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 AL139327.4-201ENST00000612362 153 ntBASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 AL139288.1-201ENST00000623748 933 ntBASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 AC073592.4-201ENST00000623827 446 ntBASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 AL133373.2-201ENST00000623187 2828 ntBASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAM1L1Q8N609 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms