Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 AC091607.1-201ENST00000490318 1060 ntBASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 AC122714.2-201ENST00000502787 707 ntBASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 AC011467.2-201ENST00000598425 242 ntBASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 AC138894.3-201ENST00000603787 634 ntBASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 AC114341.1-201ENST00000618070 349 ntBASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB42Q8N4Z0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 NUS1P2-201ENST00000417358 873 ntBASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 KRT16P4-201ENST00000453883 522 ntBASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 IGHV3-52-201ENST00000519770 353 ntBASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 AC111152.3-201ENST00000569699 673 ntBASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 LINC01451-201ENST00000623792 534 ntBASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB42Q8N4Z0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 AC007613.1-201ENST00000572811 2597 ntBASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 BNIP3P18-201ENST00000593976 575 ntBASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB42Q8N4Z0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms