Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 SAPCD2P3-201ENST00000455031 850 ntBASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 AC022211.2-201ENST00000585075 2527 ntBASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FAM43AQ8N2R8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
FAM43AQ8N2R8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
FAM43AQ8N2R8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
FAM43AQ8N2R8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
FAM43AQ8N2R8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 AL109659.2-201ENST00000606809 1674 ntBASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 SLC25A1P1-201ENST00000528351 927 ntBASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 AL592071.1-201ENST00000611956 408 ntBASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 AC103702.1-201ENST00000548801 2630 ntBASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.64■■□□□ 1.05
FAM43AQ8N2R8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 KRT18P13-201ENST00000400056 1290 ntBASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 AP005901.3-202ENST00000581653 237 ntBASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 KRT8P7-201ENST00000533003 1432 ntBASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 HOXB1-202ENST00000577092 1414 ntBASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM43AQ8N2R8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.62■■□□□ 1.05
FAM43AQ8N2R8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
FAM43AQ8N2R8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
FAM43AQ8N2R8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.62■■□□□ 1.05
FAM43AQ8N2R8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FAM43AQ8N2R8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FAM43AQ8N2R8 PCDH8P1-201ENST00000428983 2773 ntBASIC21.62■■□□□ 1.05
FAM43AQ8N2R8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FAM43AQ8N2R8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms