Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 AL133373.2-201ENST00000623187 2828 ntBASIC19.13■□□□□ 0.65
VPS52Q8N1B4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 AC092910.1-201ENST00000482027 1129 ntBASIC19.13■□□□□ 0.65
VPS52Q8N1B4 AC145285.3-201ENST00000564603 959 ntBASIC19.13■□□□□ 0.65
VPS52Q8N1B4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS52Q8N1B4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 AC012640.2-201ENST00000561606 901 ntBASIC19.12■□□□□ 0.65
VPS52Q8N1B4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 AL139288.1-201ENST00000623748 933 ntBASIC19.12■□□□□ 0.65
VPS52Q8N1B4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.12■□□□□ 0.65
VPS52Q8N1B4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 AC025062.2-201ENST00000605477 670 ntBASIC19.11■□□□□ 0.65
VPS52Q8N1B4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 AL354751.1-201ENST00000412768 1863 ntBASIC19.11■□□□□ 0.65
VPS52Q8N1B4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VPS52Q8N1B4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.1■□□□□ 0.65
VPS52Q8N1B4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms