Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 SPDYE9P-201ENST00000570642 692 ntBASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 SPDYE10P-202ENST00000612005 668 ntBASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 SPDYE8P-202ENST00000612377 668 ntBASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 AC015911.4-201ENST00000588022 1070 ntBASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 AP001059.3-201ENST00000619053 235 ntBASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 LINC00304-203ENST00000565008 1864 ntBASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 KRT18P55-202ENST00000578578 1546 ntBASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 PI4KAP1-204ENST00000612579 1703 ntBASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 MIR661-201ENST00000384842 89 ntBASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 LINC00628-201ENST00000628516 1289 ntBASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL27A1Q8IZC6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 AC129492.6-201ENST00000611383 1305 ntBASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 AC046185.3-201ENST00000623228 1824 ntBASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 AC051619.7-201ENST00000568314 623 ntBASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 AC092364.2-202ENST00000597012 1073 ntBASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 TIMM8BP1-201ENST00000452384 211 ntBASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 AC004835.2-201ENST00000603762 682 ntBASIC16.42■□□□□ 0.22
COL27A1Q8IZC6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms