Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.79■■□□□ 1.08
SMC5Q8IY18 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.79■■□□□ 1.08
SMC5Q8IY18 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.79■■□□□ 1.08
SMC5Q8IY18 AC060834.1-201ENST00000443027 2032 ntBASIC21.79■■□□□ 1.08
SMC5Q8IY18 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.79■■□□□ 1.08
SMC5Q8IY18 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 AC016734.2-201ENST00000624325 1377 ntBASIC21.79■■□□□ 1.08
SMC5Q8IY18 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.79■■□□□ 1.08
SMC5Q8IY18 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.79■■□□□ 1.08
SMC5Q8IY18 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.79■■□□□ 1.08
SMC5Q8IY18 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SMC5Q8IY18 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.79■■□□□ 1.08
SMC5Q8IY18 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.79■■□□□ 1.08
SMC5Q8IY18 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 NKILA-202ENST00000614771 2598 ntBASIC21.79■■□□□ 1.08
SMC5Q8IY18 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.79■■□□□ 1.08
SMC5Q8IY18 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMC5Q8IY18 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMC5Q8IY18 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMC5Q8IY18 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMC5Q8IY18 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMC5Q8IY18 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMC5Q8IY18 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.78■■□□□ 1.08
SMC5Q8IY18 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SMC5Q8IY18 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMC5Q8IY18 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMC5Q8IY18 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
SMC5Q8IY18 MYCLP1-201ENST00000372451 1075 ntBASIC21.78■■□□□ 1.08
SMC5Q8IY18 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.78■■□□□ 1.08
SMC5Q8IY18 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SMC5Q8IY18 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.78■■□□□ 1.08
SMC5Q8IY18 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.78■■□□□ 1.08
SMC5Q8IY18 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.78■■□□□ 1.08
SMC5Q8IY18 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SMC5Q8IY18 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SMC5Q8IY18 AC116407.4-201ENST00000623319 1061 ntBASIC21.78■■□□□ 1.08
SMC5Q8IY18 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMC5Q8IY18 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMC5Q8IY18 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SMC5Q8IY18 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SMC5Q8IY18 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMC5Q8IY18 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMC5Q8IY18 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SMC5Q8IY18 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.77■■□□□ 1.08
SMC5Q8IY18 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.77■■□□□ 1.08
SMC5Q8IY18 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.77■■□□□ 1.08
SMC5Q8IY18 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.77■■□□□ 1.08
SMC5Q8IY18 KRT18P21-201ENST00000515767 1272 ntBASIC21.77■■□□□ 1.08
SMC5Q8IY18 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.77■■□□□ 1.08
SMC5Q8IY18 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 AC011840.4-201ENST00000578471 627 ntBASIC21.77■■□□□ 1.08
SMC5Q8IY18 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.77■■□□□ 1.08
SMC5Q8IY18 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SMC5Q8IY18 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.77■■□□□ 1.08
SMC5Q8IY18 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SMC5Q8IY18 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
SMC5Q8IY18 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMC5Q8IY18 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SMC5Q8IY18 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SMC5Q8IY18 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 AC011676.5-201ENST00000624864 2660 ntBASIC21.76■■□□□ 1.07
SMC5Q8IY18 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.76■■□□□ 1.07
SMC5Q8IY18 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
SMC5Q8IY18 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SMC5Q8IY18 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms