Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 ABALON-201ENST00000629058 1903 ntBASIC16.86■□□□□ 0.29
RAB43Q86YS6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 KRT18P65-201ENST00000439811 1286 ntBASIC16.86■□□□□ 0.29
RAB43Q86YS6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 AF186996.4-201ENST00000467186 377 ntBASIC16.86■□□□□ 0.29
RAB43Q86YS6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 AC005336.2-201ENST00000593183 939 ntBASIC16.86■□□□□ 0.29
RAB43Q86YS6 AC008608.2-201ENST00000606089 416 ntBASIC16.86■□□□□ 0.29
RAB43Q86YS6 AL773604.1-201ENST00000617417 272 ntBASIC16.86■□□□□ 0.29
RAB43Q86YS6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 TP73-AS1-210ENST00000637775 1455 ntBASIC16.86■□□□□ 0.29
RAB43Q86YS6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB43Q86YS6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB43Q86YS6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 SIRPAP1-201ENST00000448467 1770 ntBASIC16.85■□□□□ 0.29
RAB43Q86YS6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.85■□□□□ 0.29
RAB43Q86YS6 FAM197Y8-203ENST00000450145 560 ntBASIC16.85■□□□□ 0.29
RAB43Q86YS6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 AP001005.1-201ENST00000571755 1248 ntBASIC16.85■□□□□ 0.29
RAB43Q86YS6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB43Q86YS6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB43Q86YS6 LINC00602-201ENST00000629776 2065 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms