Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AL359881.2-201ENST00000602973 570 ntBASIC21.96■■□□□ 1.11
COL23A1Q86Y22 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 AC005332.7-201ENST00000614046 2005 ntBASIC21.96■■□□□ 1.11
COL23A1Q86Y22 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
COL23A1Q86Y22 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
COL23A1Q86Y22 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
COL23A1Q86Y22 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL23A1Q86Y22 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 ACTG1P4-201ENST00000425123 1122 ntBASIC21.94■■□□□ 1.1
COL23A1Q86Y22 IGHV3-42-201ENST00000520410 361 ntBASIC21.94■■□□□ 1.1
COL23A1Q86Y22 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 AL135744.1-201ENST00000565098 629 ntBASIC21.94■■□□□ 1.1
COL23A1Q86Y22 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
COL23A1Q86Y22 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL23A1Q86Y22 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.93■■□□□ 1.1
COL23A1Q86Y22 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL23A1Q86Y22 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
COL23A1Q86Y22 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL23A1Q86Y22 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL23A1Q86Y22 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL23A1Q86Y22 RN7SL589P-201ENST00000481268 310 ntBASIC21.93■■□□□ 1.1
COL23A1Q86Y22 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL23A1Q86Y22 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.93■■□□□ 1.1
COL23A1Q86Y22 AC126763.1-201ENST00000552015 2118 ntBASIC21.93■■□□□ 1.1
COL23A1Q86Y22 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.93■■□□□ 1.1
COL23A1Q86Y22 AC026150.2-201ENST00000564693 1156 ntBASIC21.93■■□□□ 1.1
COL23A1Q86Y22 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL23A1Q86Y22 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
COL23A1Q86Y22 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL23A1Q86Y22 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 SPCS2P4-201ENST00000436160 681 ntBASIC21.92■■□□□ 1.1
COL23A1Q86Y22 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.92■■□□□ 1.1
COL23A1Q86Y22 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.92■■□□□ 1.1
COL23A1Q86Y22 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 BX276092.7-203ENST00000637198 1536 ntBASIC21.91■■□□□ 1.1
COL23A1Q86Y22 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms