Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 KRT8P10-201ENST00000450021 1447 ntBASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 AC026396.1-201ENST00000419388 421 ntBASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 AC073592.5-201ENST00000624854 528 ntBASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 AC006116.8-202ENST00000587620 1550 ntBASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRTM4Q86VH4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 AC012317.2-201ENST00000623305 2251 ntBASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 AL356309.3-201ENST00000624132 1934 ntBASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 AC005104.2-201ENST00000427818 678 ntBASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 AP002469.2-201ENST00000531724 424 ntBASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 AL139288.1-201ENST00000623748 933 ntBASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 AC008764.6-201ENST00000595909 2069 ntBASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM4Q86VH4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 MYCLP1-201ENST00000372451 1075 ntBASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 TP73-AS1-207ENST00000624167 988 ntBASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM4Q86VH4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms