Protein–RNA interactions for Protein: Q86TD4

SRL, Sarcalumenin, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRLQ86TD4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRLQ86TD4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
SRLQ86TD4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRLQ86TD4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRLQ86TD4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRLQ86TD4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRLQ86TD4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.71■□□□□ 0.59
SRLQ86TD4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SRLQ86TD4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRLQ86TD4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.71■□□□□ 0.59
SRLQ86TD4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SRLQ86TD4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRLQ86TD4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SRLQ86TD4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.71■□□□□ 0.58
SRLQ86TD4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
SRLQ86TD4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRLQ86TD4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.7■□□□□ 0.58
SRLQ86TD4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRLQ86TD4 AL163051.1-201ENST00000569214 1512 ntBASIC18.7■□□□□ 0.58
SRLQ86TD4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRLQ86TD4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.7■□□□□ 0.58
SRLQ86TD4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRLQ86TD4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SRLQ86TD4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRLQ86TD4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRLQ86TD4 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.7■□□□□ 0.58
SRLQ86TD4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.7■□□□□ 0.58
SRLQ86TD4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.7■□□□□ 0.58
SRLQ86TD4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRLQ86TD4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SRLQ86TD4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRLQ86TD4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRLQ86TD4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.7■□□□□ 0.58
SRLQ86TD4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.7■□□□□ 0.58
SRLQ86TD4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRLQ86TD4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.69■□□□□ 0.58
SRLQ86TD4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SRLQ86TD4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SRLQ86TD4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.69■□□□□ 0.58
SRLQ86TD4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SRLQ86TD4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.69■□□□□ 0.58
SRLQ86TD4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.69■□□□□ 0.58
SRLQ86TD4 AC009065.1-201ENST00000564055 1225 ntBASIC18.69■□□□□ 0.58
SRLQ86TD4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.69■□□□□ 0.58
SRLQ86TD4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SRLQ86TD4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.69■□□□□ 0.58
SRLQ86TD4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SRLQ86TD4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.69■□□□□ 0.58
SRLQ86TD4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRLQ86TD4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.69■□□□□ 0.58
SRLQ86TD4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRLQ86TD4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRLQ86TD4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRLQ86TD4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRLQ86TD4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRLQ86TD4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.68■□□□□ 0.58
SRLQ86TD4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRLQ86TD4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.68■□□□□ 0.58
SRLQ86TD4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRLQ86TD4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRLQ86TD4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRLQ86TD4 AC112907.2-201ENST00000448639 330 ntBASIC18.68■□□□□ 0.58
SRLQ86TD4 KRT18P35-201ENST00000510488 1269 ntBASIC18.68■□□□□ 0.58
SRLQ86TD4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRLQ86TD4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.68■□□□□ 0.58
SRLQ86TD4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.68■□□□□ 0.58
SRLQ86TD4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.68■□□□□ 0.58
SRLQ86TD4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRLQ86TD4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRLQ86TD4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.68■□□□□ 0.58
SRLQ86TD4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SRLQ86TD4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.68■□□□□ 0.58
SRLQ86TD4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRLQ86TD4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRLQ86TD4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SRLQ86TD4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRLQ86TD4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRLQ86TD4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRLQ86TD4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRLQ86TD4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRLQ86TD4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRLQ86TD4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRLQ86TD4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRLQ86TD4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms