Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AC113404.2-201ENST00000507884 177 ntBASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 PRELID1P1-202ENST00000567272 903 ntBASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 AC011840.4-201ENST00000578471 627 ntBASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 AP000867.3-201ENST00000524675 377 ntBASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 AC126763.1-201ENST00000552015 2118 ntBASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 NPAP1P7-201ENST00000613027 823 ntBASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 AC004263.2-201ENST00000617183 678 ntBASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.29■□□□□ 0.2
CHMP1BQ7LBR1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 Z69720.1-201ENST00000601483 472 ntBASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms