Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC008556.1-201ENST00000610908 2040 ntBASIC18.45■□□□□ 0.54
FOXR1Q6PIV2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXR1Q6PIV2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXR1Q6PIV2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXR1Q6PIV2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
FOXR1Q6PIV2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXR1Q6PIV2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 AC009947.2-201ENST00000444014 672 ntBASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 AL512604.3-201ENST00000569583 964 ntBASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 HCG11-201ENST00000411553 5696 ntBASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXR1Q6PIV2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 KRT18P48-201ENST00000434763 852 ntBASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 AL671277.2-201ENST00000458060 996 ntBASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 AL353719.1-201ENST00000566847 864 ntBASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 AL031432.5-201ENST00000641059 760 ntBASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXR1Q6PIV2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 KRT126P-201ENST00000549467 1181 ntBASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms