Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 AC006504.4-201ENST00000592118 1568 ntBASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 REXO1L9P-201ENST00000604264 2108 ntBASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 BX276092.7-203ENST00000637198 1536 ntBASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 AC003669.1-201ENST00000334569 611 ntBASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 KLF4P1-201ENST00000412782 1185 ntBASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 AC005104.2-201ENST00000427818 678 ntBASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 STK25P1-201ENST00000585406 838 ntBASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 AP000997.3-201ENST00000623333 2250 ntBASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC62Q6P9F0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 ELK2BP-201ENST00000415014 1224 ntBASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 AC040169.1-201ENST00000565382 521 ntBASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 AC055717.3-201ENST00000622967 595 ntBASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC62Q6P9F0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC62Q6P9F0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.77■□□□□ 0.75
CCDC62Q6P9F0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
CCDC62Q6P9F0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC62Q6P9F0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC62Q6P9F0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
CCDC62Q6P9F0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC62Q6P9F0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CCDC62Q6P9F0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 YBX2P1-201ENST00000394192 760 ntBASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 RPSAP43-201ENST00000402237 625 ntBASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 UPF3AP3-201ENST00000420996 769 ntBASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 SIGLEC30P-201ENST00000455569 941 ntBASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 AC108751.1-201ENST00000490852 363 ntBASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 RNA5SP416-201ENST00000516838 111 ntBASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms