Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF549Q6P9A3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.52■□□□□ 0.39
ZNF549Q6P9A3 AC106820.2-201ENST00000563775 3264 ntBASIC17.52■□□□□ 0.39
ZNF549Q6P9A3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF549Q6P9A3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF549Q6P9A3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 AC005336.2-201ENST00000593183 939 ntBASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF549Q6P9A3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 COX5BP2-201ENST00000392354 334 ntBASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 IGHV3-41-201ENST00000613121 348 ntBASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 LYSMD4-203ENST00000378904 2122 ntBASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF549Q6P9A3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 AC125634.1-201ENST00000438758 1403 ntBASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 AC007967.3-201ENST00000434308 558 ntBASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 AC091607.1-201ENST00000490318 1060 ntBASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 AC090616.6-201ENST00000582640 721 ntBASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 AC116407.4-201ENST00000623319 1061 ntBASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 AC016734.2-201ENST00000624325 1377 ntBASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms