Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 IGHV3-52-201ENST00000519770 353 ntBASIC18.3■□□□□ 0.52
LRRC38Q5VT99 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 AC246785.2-201ENST00000432512 513 ntBASIC18.29■□□□□ 0.52
LRRC38Q5VT99 AC103564.2-201ENST00000432853 1299 ntBASIC18.29■□□□□ 0.52
LRRC38Q5VT99 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 AC005336.2-201ENST00000593183 939 ntBASIC18.29■□□□□ 0.52
LRRC38Q5VT99 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.29■□□□□ 0.52
LRRC38Q5VT99 IGHV3-41-201ENST00000613121 348 ntBASIC18.29■□□□□ 0.52
LRRC38Q5VT99 AL121956.5-201ENST00000625261 221 ntBASIC18.29■□□□□ 0.52
LRRC38Q5VT99 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRRC38Q5VT99 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 AC022211.2-201ENST00000585075 2527 ntBASIC18.28■□□□□ 0.52
LRRC38Q5VT99 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 AC011840.4-201ENST00000578471 627 ntBASIC18.28■□□□□ 0.52
LRRC38Q5VT99 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 AC012313.1-201ENST00000593393 3059 ntBASIC18.28■□□□□ 0.52
LRRC38Q5VT99 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC38Q5VT99 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC38Q5VT99 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.27■□□□□ 0.52
LRRC38Q5VT99 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC38Q5VT99 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRC38Q5VT99 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC38Q5VT99 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LRRC38Q5VT99 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC38Q5VT99 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC38Q5VT99 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRC38Q5VT99 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms