Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH2D4BQ5SQS7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SH2D4BQ5SQS7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 LINC00602-201ENST00000629776 2065 ntBASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 AC022211.2-201ENST00000585075 2527 ntBASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 AC007663.1-201ENST00000438948 1240 ntBASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 AL355075.4-201ENST00000554988 638 ntBASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 AC116562.4-202ENST00000641738 218 ntBASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 FLJ16779-201ENST00000612722 7638 ntBASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D4BQ5SQS7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 AL390955.1-201ENST00000428694 934 ntBASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 CROCCP2-202ENST00000412962 2773 ntBASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 AL118508.1-201ENST00000613502 2345 ntBASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SH2D4BQ5SQS7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 MIR1238-201ENST00000408483 83 ntBASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 AL596275.1-201ENST00000423464 877 ntBASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D4BQ5SQS7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms