Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ODF4Q2M2E3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 MIR3917-201ENST00000580971 93 ntBASIC15.65■□□□□ 0.1
ODF4Q2M2E3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 AC079328.2-201ENST00000561241 3354 ntBASIC15.65■□□□□ 0.1
ODF4Q2M2E3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ODF4Q2M2E3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
ODF4Q2M2E3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 LINC00304-203ENST00000565008 1864 ntBASIC15.64■□□□□ 0.09
ODF4Q2M2E3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 FAM87A-204ENST00000613235 858 ntBASIC15.64■□□□□ 0.09
ODF4Q2M2E3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.64■□□□□ 0.09
ODF4Q2M2E3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 TMEM191A-211ENST00000637163 1067 ntBASIC15.64■□□□□ 0.09
ODF4Q2M2E3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.64■□□□□ 0.09
ODF4Q2M2E3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 AL138688.1-201ENST00000624851 1594 ntBASIC15.63■□□□□ 0.09
ODF4Q2M2E3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ODF4Q2M2E3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms