Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CDH17Q12864 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH17Q12864 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDH17Q12864 LYSMD4-203ENST00000378904 2122 ntBASIC17.83■□□□□ 0.44
CDH17Q12864 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
CDH17Q12864 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH17Q12864 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
CDH17Q12864 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH17Q12864 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDH17Q12864 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CDH17Q12864 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH17Q12864 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH17Q12864 AC005332.1-201ENST00000577698 1310 ntBASIC17.82■□□□□ 0.44
CDH17Q12864 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH17Q12864 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
CDH17Q12864 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDH17Q12864 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH17Q12864 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 AC002558.1-201ENST00000488906 803 ntBASIC17.82■□□□□ 0.44
CDH17Q12864 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH17Q12864 AC011840.4-201ENST00000578471 627 ntBASIC17.82■□□□□ 0.44
CDH17Q12864 NTF6B-201ENST00000591913 560 ntBASIC17.82■□□□□ 0.44
CDH17Q12864 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDH17Q12864 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH17Q12864 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH17Q12864 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDH17Q12864 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH17Q12864 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDH17Q12864 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 AC125634.1-201ENST00000438758 1403 ntBASIC17.81■□□□□ 0.44
CDH17Q12864 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH17Q12864 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH17Q12864 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH17Q12864 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH17Q12864 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CDH17Q12864 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH17Q12864 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.81■□□□□ 0.44
CDH17Q12864 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CDH17Q12864 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH17Q12864 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
CDH17Q12864 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CDH17Q12864 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH17Q12864 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH17Q12864 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CDH17Q12864 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH17Q12864 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CDH17Q12864 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH17Q12864 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH17Q12864 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH17Q12864 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CDH17Q12864 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CDH17Q12864 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH17Q12864 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH17Q12864 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CDH17Q12864 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH17Q12864 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDH17Q12864 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH17Q12864 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH17Q12864 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CDH17Q12864 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CDH17Q12864 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH17Q12864 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH17Q12864 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH17Q12864 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH17Q12864 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH17Q12864 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH17Q12864 AC007967.3-201ENST00000434308 558 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms