Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
GCNT1Q02742 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
GCNT1Q02742 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
GCNT1Q02742 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GCNT1Q02742 POM121L3P-201ENST00000419331 1163 ntBASIC18.83■□□□□ 0.6
GCNT1Q02742 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
GCNT1Q02742 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
GCNT1Q02742 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.83■□□□□ 0.6
GCNT1Q02742 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.83■□□□□ 0.6
GCNT1Q02742 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.83■□□□□ 0.6
GCNT1Q02742 AC111152.3-201ENST00000569699 673 ntBASIC18.83■□□□□ 0.6
GCNT1Q02742 AC114341.1-201ENST00000618070 349 ntBASIC18.83■□□□□ 0.6
GCNT1Q02742 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
GCNT1Q02742 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GCNT1Q02742 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GCNT1Q02742 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GCNT1Q02742 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.83■□□□□ 0.6
GCNT1Q02742 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GCNT1Q02742 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GCNT1Q02742 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.83■□□□□ 0.6
GCNT1Q02742 KRT8P10-201ENST00000450021 1447 ntBASIC18.83■□□□□ 0.6
GCNT1Q02742 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GCNT1Q02742 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.82■□□□□ 0.6
GCNT1Q02742 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
GCNT1Q02742 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GCNT1Q02742 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GCNT1Q02742 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.82■□□□□ 0.6
GCNT1Q02742 UPK3BP1-201ENST00000428678 509 ntBASIC18.82■□□□□ 0.6
GCNT1Q02742 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.82■□□□□ 0.6
GCNT1Q02742 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.82■□□□□ 0.6
GCNT1Q02742 AC096582.2-201ENST00000510860 516 ntBASIC18.82■□□□□ 0.6
GCNT1Q02742 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
GCNT1Q02742 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.82■□□□□ 0.6
GCNT1Q02742 STK25P1-201ENST00000585406 838 ntBASIC18.82■□□□□ 0.6
GCNT1Q02742 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.82■□□□□ 0.6
GCNT1Q02742 AD001527.2-201ENST00000622994 785 ntBASIC18.82■□□□□ 0.6
GCNT1Q02742 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.82■□□□□ 0.6
GCNT1Q02742 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.82■□□□□ 0.6
GCNT1Q02742 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GCNT1Q02742 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.82■□□□□ 0.6
GCNT1Q02742 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.82■□□□□ 0.6
GCNT1Q02742 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCNT1Q02742 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
GCNT1Q02742 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
GCNT1Q02742 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
GCNT1Q02742 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.81■□□□□ 0.6
GCNT1Q02742 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCNT1Q02742 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.81■□□□□ 0.6
GCNT1Q02742 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCNT1Q02742 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.81■□□□□ 0.6
GCNT1Q02742 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCNT1Q02742 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCNT1Q02742 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCNT1Q02742 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.81■□□□□ 0.6
GCNT1Q02742 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.81■□□□□ 0.6
GCNT1Q02742 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GCNT1Q02742 AC093458.2-201ENST00000623150 629 ntBASIC18.81■□□□□ 0.6
GCNT1Q02742 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.81■□□□□ 0.6
GCNT1Q02742 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.81■□□□□ 0.6
GCNT1Q02742 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
GCNT1Q02742 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCNT1Q02742 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.81■□□□□ 0.6
GCNT1Q02742 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GCNT1Q02742 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GCNT1Q02742 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCNT1Q02742 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCNT1Q02742 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCNT1Q02742 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCNT1Q02742 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GCNT1Q02742 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.8■□□□□ 0.6
GCNT1Q02742 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCNT1Q02742 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
GCNT1Q02742 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCNT1Q02742 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.8■□□□□ 0.6
GCNT1Q02742 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.8■□□□□ 0.6
GCNT1Q02742 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCNT1Q02742 RCN1P2-201ENST00000398357 915 ntBASIC18.8■□□□□ 0.6
GCNT1Q02742 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.8■□□□□ 0.6
GCNT1Q02742 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GCNT1Q02742 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCNT1Q02742 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GCNT1Q02742 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCNT1Q02742 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.8■□□□□ 0.6
GCNT1Q02742 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCNT1Q02742 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GCNT1Q02742 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms