Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
IRX4P78413 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IRX4P78413 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IRX4P78413 AC138028.4-201ENST00000564984 1845 ntBASIC18.39■□□□□ 0.53
IRX4P78413 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
IRX4P78413 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IRX4P78413 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IRX4P78413 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IRX4P78413 AC008556.1-201ENST00000610908 2040 ntBASIC18.39■□□□□ 0.53
IRX4P78413 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 LINC00896-202ENST00000609602 2128 ntBASIC18.38■□□□□ 0.53
IRX4P78413 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.38■□□□□ 0.53
IRX4P78413 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 AKR1C7P-201ENST00000305623 895 ntBASIC18.38■□□□□ 0.53
IRX4P78413 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
IRX4P78413 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
IRX4P78413 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.38■□□□□ 0.53
IRX4P78413 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.38■□□□□ 0.53
IRX4P78413 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.38■□□□□ 0.53
IRX4P78413 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.38■□□□□ 0.53
IRX4P78413 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.38■□□□□ 0.53
IRX4P78413 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.38■□□□□ 0.53
IRX4P78413 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.38■□□□□ 0.53
IRX4P78413 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.38■□□□□ 0.53
IRX4P78413 Z69720.1-201ENST00000601483 472 ntBASIC18.38■□□□□ 0.53
IRX4P78413 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.38■□□□□ 0.53
IRX4P78413 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.38■□□□□ 0.53
IRX4P78413 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
IRX4P78413 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
IRX4P78413 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IRX4P78413 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IRX4P78413 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX4P78413 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
IRX4P78413 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
IRX4P78413 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX4P78413 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
IRX4P78413 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX4P78413 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX4P78413 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IRX4P78413 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX4P78413 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX4P78413 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX4P78413 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX4P78413 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
IRX4P78413 MIR574-201ENST00000385209 96 ntBASIC18.37■□□□□ 0.53
IRX4P78413 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.37■□□□□ 0.53
IRX4P78413 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
IRX4P78413 KRT18P23-201ENST00000435622 1283 ntBASIC18.37■□□□□ 0.53
IRX4P78413 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX4P78413 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.37■□□□□ 0.53
IRX4P78413 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.37■□□□□ 0.53
IRX4P78413 AL390719.2-201ENST00000606993 987 ntBASIC18.37■□□□□ 0.53
IRX4P78413 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IRX4P78413 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX4P78413 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX4P78413 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
IRX4P78413 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX4P78413 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IRX4P78413 MYLKP1-201ENST00000509077 1580 ntBASIC18.37■□□□□ 0.53
IRX4P78413 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
IRX4P78413 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.37■□□□□ 0.53
IRX4P78413 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
IRX4P78413 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX4P78413 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX4P78413 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX4P78413 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
IRX4P78413 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX4P78413 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
IRX4P78413 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX4P78413 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
IRX4P78413 GNAS-203ENST00000306120 1878 ntBASIC18.36■□□□□ 0.53
IRX4P78413 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX4P78413 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX4P78413 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX4P78413 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.36■□□□□ 0.53
IRX4P78413 KRT18P13-201ENST00000400056 1290 ntBASIC18.36■□□□□ 0.53
IRX4P78413 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX4P78413 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
IRX4P78413 IGHV3-47-201ENST00000425060 335 ntBASIC18.36■□□□□ 0.53
IRX4P78413 PMS2P1-201ENST00000431037 1228 ntBASIC18.36■□□□□ 0.53
IRX4P78413 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.36■□□□□ 0.53
IRX4P78413 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
IRX4P78413 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.36■□□□□ 0.53
IRX4P78413 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.36■□□□□ 0.53
IRX4P78413 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX4P78413 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms