Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SEC61A1P61619 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.49■□□□□ 0.07
SEC61A1P61619 SEC1P-202ENST00000473944 940 ntBASIC15.49■□□□□ 0.07
SEC61A1P61619 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.49■□□□□ 0.07
SEC61A1P61619 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.49■□□□□ 0.07
SEC61A1P61619 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.49■□□□□ 0.07
SEC61A1P61619 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.49■□□□□ 0.07
SEC61A1P61619 AC112497.1-201ENST00000624824 639 ntBASIC15.49■□□□□ 0.07
SEC61A1P61619 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SEC61A1P61619 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.49■□□□□ 0.07
SEC61A1P61619 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.49■□□□□ 0.07
SEC61A1P61619 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SEC61A1P61619 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SEC61A1P61619 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.48■□□□□ 0.07
SEC61A1P61619 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.48■□□□□ 0.07
SEC61A1P61619 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SEC61A1P61619 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 AL023806.1-201ENST00000603994 1649 ntBASIC15.48■□□□□ 0.07
SEC61A1P61619 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.48■□□□□ 0.07
SEC61A1P61619 KRT18P23-201ENST00000435622 1283 ntBASIC15.48■□□□□ 0.07
SEC61A1P61619 RASA4DP-201ENST00000460726 1199 ntBASIC15.48■□□□□ 0.07
SEC61A1P61619 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.48■□□□□ 0.07
SEC61A1P61619 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.48■□□□□ 0.07
SEC61A1P61619 AC092597.1-201ENST00000487352 616 ntBASIC15.48■□□□□ 0.07
SEC61A1P61619 FAM86EP-206ENST00000510506 987 ntBASIC15.48■□□□□ 0.07
SEC61A1P61619 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.48■□□□□ 0.07
SEC61A1P61619 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
SEC61A1P61619 HYMAI.1-201ENST00000620949 238 ntBASIC15.48■□□□□ 0.07
SEC61A1P61619 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.48■□□□□ 0.07
SEC61A1P61619 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.48■□□□□ 0.07
SEC61A1P61619 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.48■□□□□ 0.07
SEC61A1P61619 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.48■□□□□ 0.07
SEC61A1P61619 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SEC61A1P61619 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.47■□□□□ 0.07
SEC61A1P61619 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SEC61A1P61619 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.47■□□□□ 0.07
SEC61A1P61619 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SEC61A1P61619 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.47■□□□□ 0.07
SEC61A1P61619 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms