Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.4□□□□□ -0.1
SPCS3P61009 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.4□□□□□ -0.1
SPCS3P61009 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.4□□□□□ -0.1
SPCS3P61009 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.4□□□□□ -0.1
SPCS3P61009 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS3P61009 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS3P61009 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.4□□□□□ -0.1
SPCS3P61009 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 HLA-J-201ENST00000462773 1622 ntBASIC14.4□□□□□ -0.1
SPCS3P61009 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS3P61009 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
SPCS3P61009 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.4□□□□□ -0.1
SPCS3P61009 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPCS3P61009 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.4□□□□□ -0.1
SPCS3P61009 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
SPCS3P61009 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
SPCS3P61009 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SPCS3P61009 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.39□□□□□ -0.11
SPCS3P61009 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.39□□□□□ -0.11
SPCS3P61009 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.39□□□□□ -0.11
SPCS3P61009 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
SPCS3P61009 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.39□□□□□ -0.11
SPCS3P61009 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SPCS3P61009 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.39□□□□□ -0.11
SPCS3P61009 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.39□□□□□ -0.11
SPCS3P61009 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.39□□□□□ -0.11
SPCS3P61009 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SPCS3P61009 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.39□□□□□ -0.11
SPCS3P61009 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.39□□□□□ -0.11
SPCS3P61009 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.39□□□□□ -0.11
SPCS3P61009 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
SPCS3P61009 LINC00304-203ENST00000565008 1864 ntBASIC14.39□□□□□ -0.11
SPCS3P61009 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.39□□□□□ -0.11
SPCS3P61009 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.39□□□□□ -0.11
SPCS3P61009 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.39□□□□□ -0.11
SPCS3P61009 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS3P61009 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.38□□□□□ -0.11
SPCS3P61009 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS3P61009 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS3P61009 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.38□□□□□ -0.11
SPCS3P61009 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
SPCS3P61009 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS3P61009 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS3P61009 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.38□□□□□ -0.11
SPCS3P61009 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.38□□□□□ -0.11
SPCS3P61009 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS3P61009 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.38□□□□□ -0.11
SPCS3P61009 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS3P61009 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS3P61009 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS3P61009 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS3P61009 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SPCS3P61009 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS3P61009 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SPCS3P61009 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
SPCS3P61009 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.38□□□□□ -0.11
SPCS3P61009 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS3P61009 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.38□□□□□ -0.11
SPCS3P61009 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.38□□□□□ -0.11
SPCS3P61009 AP003071.4-201ENST00000562276 1284 ntBASIC14.38□□□□□ -0.11
SPCS3P61009 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.38□□□□□ -0.11
SPCS3P61009 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS3P61009 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
SPCS3P61009 AC010653.2-201ENST00000623505 997 ntBASIC14.38□□□□□ -0.11
SPCS3P61009 LINC01451-201ENST00000623792 534 ntBASIC14.38□□□□□ -0.11
SPCS3P61009 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms