Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VSX2P58304 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.9■□□□□ 0.3
VSX2P58304 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSX2P58304 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSX2P58304 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.9■□□□□ 0.3
VSX2P58304 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.9■□□□□ 0.3
VSX2P58304 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.9■□□□□ 0.3
VSX2P58304 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSX2P58304 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSX2P58304 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VSX2P58304 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.9■□□□□ 0.3
VSX2P58304 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSX2P58304 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.9■□□□□ 0.3
VSX2P58304 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.9■□□□□ 0.3
VSX2P58304 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VSX2P58304 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSX2P58304 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSX2P58304 COX5BP2-201ENST00000392354 334 ntBASIC16.9■□□□□ 0.3
VSX2P58304 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
VSX2P58304 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
VSX2P58304 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.9■□□□□ 0.3
VSX2P58304 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.9■□□□□ 0.3
VSX2P58304 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VSX2P58304 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.9■□□□□ 0.3
VSX2P58304 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.9■□□□□ 0.3
VSX2P58304 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.9■□□□□ 0.3
VSX2P58304 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSX2P58304 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VSX2P58304 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.9■□□□□ 0.3
VSX2P58304 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VSX2P58304 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSX2P58304 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.9■□□□□ 0.3
VSX2P58304 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.9■□□□□ 0.3
VSX2P58304 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.9■□□□□ 0.3
VSX2P58304 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.89■□□□□ 0.3
VSX2P58304 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.89■□□□□ 0.3
VSX2P58304 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.89■□□□□ 0.3
VSX2P58304 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
VSX2P58304 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
VSX2P58304 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VSX2P58304 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.89■□□□□ 0.29
VSX2P58304 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
VSX2P58304 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.89■□□□□ 0.29
VSX2P58304 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 DDX43P3-201ENST00000441064 443 ntBASIC16.89■□□□□ 0.29
VSX2P58304 FAAHP1-202ENST00000446499 1238 ntBASIC16.89■□□□□ 0.29
VSX2P58304 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.89■□□□□ 0.29
VSX2P58304 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
VSX2P58304 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.89■□□□□ 0.29
VSX2P58304 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.89■□□□□ 0.29
VSX2P58304 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.89■□□□□ 0.29
VSX2P58304 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 SIRPAP1-201ENST00000448467 1770 ntBASIC16.89■□□□□ 0.29
VSX2P58304 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 PKD1P1-201ENST00000458669 6805 ntBASIC16.89■□□□□ 0.29
VSX2P58304 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VSX2P58304 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSX2P58304 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
VSX2P58304 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
VSX2P58304 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VSX2P58304 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.88■□□□□ 0.29
VSX2P58304 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.88■□□□□ 0.29
VSX2P58304 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.88■□□□□ 0.29
VSX2P58304 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.88■□□□□ 0.29
VSX2P58304 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.88■□□□□ 0.29
VSX2P58304 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.88■□□□□ 0.29
VSX2P58304 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 BX276092.7-203ENST00000637198 1536 ntBASIC16.88■□□□□ 0.29
VSX2P58304 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VSX2P58304 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.88■□□□□ 0.29
VSX2P58304 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.88■□□□□ 0.29
VSX2P58304 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.88■□□□□ 0.29
VSX2P58304 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 ABCD1P5-201ENST00000445663 754 ntBASIC16.88■□□□□ 0.29
VSX2P58304 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.88■□□□□ 0.29
VSX2P58304 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.88■□□□□ 0.29
VSX2P58304 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.88■□□□□ 0.29
VSX2P58304 AC122714.2-201ENST00000502787 707 ntBASIC16.88■□□□□ 0.29
VSX2P58304 AF238378.1-201ENST00000526806 358 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms