Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
KCNQ4P56696 BAD-202ENST00000394531 631 ntTSL 3 BASIC22.32■■□□□ 1.16
KCNQ4P56696 NABP1-203ENST00000409510 843 ntTSL 5 BASIC22.32■■□□□ 1.16
KCNQ4P56696 TFAMP1-201ENST00000412727 736 ntBASIC22.32■■□□□ 1.16
KCNQ4P56696 AL355306.1-201ENST00000415580 579 ntBASIC22.32■■□□□ 1.16
KCNQ4P56696 GATB-205ENST00000508611 605 ntTSL 2 BASIC22.32■■□□□ 1.16
KCNQ4P56696 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC22.32■■□□□ 1.16
KCNQ4P56696 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNQ4P56696 AC112191.1-201ENST00000523689 701 ntBASIC22.32■■□□□ 1.16
KCNQ4P56696 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC22.32■■□□□ 1.16
KCNQ4P56696 AC087641.1-201ENST00000557561 1021 ntBASIC22.32■■□□□ 1.16
KCNQ4P56696 AC051619.7-201ENST00000568314 623 ntBASIC22.32■■□□□ 1.16
KCNQ4P56696 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.32■■□□□ 1.16
KCNQ4P56696 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNQ4P56696 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
KCNQ4P56696 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNQ4P56696 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.32■■□□□ 1.16
KCNQ4P56696 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNQ4P56696 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.32■■□□□ 1.16
KCNQ4P56696 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNQ4P56696 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KCNQ4P56696 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
KCNQ4P56696 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.31■■□□□ 1.16
KCNQ4P56696 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNQ4P56696 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
KCNQ4P56696 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KCNQ4P56696 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC22.31■■□□□ 1.16
KCNQ4P56696 RAC2-204ENST00000406508 893 ntTSL 5 BASIC22.31■■□□□ 1.16
KCNQ4P56696 FALEC-201ENST00000416894 566 ntTSL 3 BASIC22.31■■□□□ 1.16
KCNQ4P56696 AL671277.1-201ENST00000429656 993 ntBASIC22.31■■□□□ 1.16
KCNQ4P56696 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC22.31■■□□□ 1.16
KCNQ4P56696 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
KCNQ4P56696 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KCNQ4P56696 TERF1P3-201ENST00000505638 1227 ntBASIC22.31■■□□□ 1.16
KCNQ4P56696 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC22.31■■□□□ 1.16
KCNQ4P56696 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC22.31■■□□□ 1.16
KCNQ4P56696 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
KCNQ4P56696 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
KCNQ4P56696 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
KCNQ4P56696 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KCNQ4P56696 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNQ4P56696 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 MEIS3P1-201ENST00000495167 958 ntBASIC22.3■■□□□ 1.16
KCNQ4P56696 AP005018.1-201ENST00000525475 301 ntBASIC22.3■■□□□ 1.16
KCNQ4P56696 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.3■■□□□ 1.16
KCNQ4P56696 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC22.3■■□□□ 1.16
KCNQ4P56696 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.3■■□□□ 1.16
KCNQ4P56696 YTHDF3-AS1-201ENST00000603538 718 ntBASIC22.3■■□□□ 1.16
KCNQ4P56696 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC22.3■■□□□ 1.16
KCNQ4P56696 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC22.3■■□□□ 1.16
KCNQ4P56696 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
KCNQ4P56696 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.3■■□□□ 1.16
KCNQ4P56696 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC22.3■■□□□ 1.16
KCNQ4P56696 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 AL096828.2-201ENST00000567259 1965 ntBASIC22.3■■□□□ 1.16
KCNQ4P56696 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNQ4P56696 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC22.3■■□□□ 1.16
KCNQ4P56696 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
KCNQ4P56696 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
KCNQ4P56696 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
KCNQ4P56696 AL592309.1-201ENST00000443127 649 ntBASIC22.29■■□□□ 1.16
KCNQ4P56696 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
KCNQ4P56696 AC067863.1-201ENST00000494933 530 ntBASIC22.29■■□□□ 1.16
KCNQ4P56696 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC22.29■■□□□ 1.16
KCNQ4P56696 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC22.29■■□□□ 1.16
KCNQ4P56696 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.29■■□□□ 1.16
KCNQ4P56696 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ4P56696 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
KCNQ4P56696 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ4P56696 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ4P56696 FO538757.1-201ENST00000623083 1397 ntBASIC22.28■■□□□ 1.16
KCNQ4P56696 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms