Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PER3P56645 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PER3P56645 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PER3P56645 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PER3P56645 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PER3P56645 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.36■□□□□ 0.21
PER3P56645 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.36■□□□□ 0.21
PER3P56645 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
PER3P56645 MTMR9LP-203ENST00000426597 1545 ntBASIC16.36■□□□□ 0.21
PER3P56645 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PER3P56645 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PER3P56645 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.36■□□□□ 0.21
PER3P56645 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PER3P56645 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PER3P56645 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.36■□□□□ 0.21
PER3P56645 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.36■□□□□ 0.21
PER3P56645 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.36■□□□□ 0.21
PER3P56645 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.36■□□□□ 0.21
PER3P56645 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PER3P56645 POLD2P1-201ENST00000511220 997 ntBASIC16.36■□□□□ 0.21
PER3P56645 RNA5SP419-201ENST00000515908 135 ntBASIC16.36■□□□□ 0.21
PER3P56645 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.36■□□□□ 0.21
PER3P56645 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PER3P56645 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.36■□□□□ 0.21
PER3P56645 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PER3P56645 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PER3P56645 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PER3P56645 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PER3P56645 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PER3P56645 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.36■□□□□ 0.21
PER3P56645 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PER3P56645 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.36■□□□□ 0.21
PER3P56645 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.36■□□□□ 0.21
PER3P56645 KRT8P50-201ENST00000562022 1438 ntBASIC16.36■□□□□ 0.21
PER3P56645 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.35■□□□□ 0.21
PER3P56645 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
PER3P56645 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PER3P56645 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.35■□□□□ 0.21
PER3P56645 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.35■□□□□ 0.21
PER3P56645 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.35■□□□□ 0.21
PER3P56645 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.35■□□□□ 0.21
PER3P56645 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.35■□□□□ 0.21
PER3P56645 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
PER3P56645 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.35■□□□□ 0.21
PER3P56645 AC008608.2-201ENST00000606089 416 ntBASIC16.35■□□□□ 0.21
PER3P56645 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PER3P56645 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.35■□□□□ 0.21
PER3P56645 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.35■□□□□ 0.21
PER3P56645 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.35■□□□□ 0.21
PER3P56645 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PER3P56645 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PER3P56645 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.35■□□□□ 0.21
PER3P56645 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PER3P56645 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.34■□□□□ 0.21
PER3P56645 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PER3P56645 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.34■□□□□ 0.21
PER3P56645 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PER3P56645 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PER3P56645 MIR940-201ENST00000401276 94 ntBASIC16.34■□□□□ 0.21
PER3P56645 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.34■□□□□ 0.21
PER3P56645 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.34■□□□□ 0.21
PER3P56645 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.34■□□□□ 0.21
PER3P56645 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.34■□□□□ 0.21
PER3P56645 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.34■□□□□ 0.21
PER3P56645 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.34■□□□□ 0.21
PER3P56645 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.34■□□□□ 0.21
PER3P56645 AC139887.3-201ENST00000568585 713 ntBASIC16.34■□□□□ 0.21
PER3P56645 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.34■□□□□ 0.21
PER3P56645 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.34■□□□□ 0.21
PER3P56645 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.34■□□□□ 0.21
PER3P56645 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
PER3P56645 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.34■□□□□ 0.21
PER3P56645 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PER3P56645 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms