Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDH11P55287 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
CDH11P55287 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 CROCCP2-202ENST00000412962 2773 ntBASIC16.19■□□□□ 0.18
CDH11P55287 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 NKILA-202ENST00000614771 2598 ntBASIC16.19■□□□□ 0.18
CDH11P55287 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDH11P55287 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 AC100803.2-201ENST00000562459 1963 ntBASIC16.19■□□□□ 0.18
CDH11P55287 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH11P55287 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDH11P55287 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH11P55287 IER3-202ENST00000376377 1350 ntBASIC16.19■□□□□ 0.18
CDH11P55287 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 STARP1-201ENST00000397973 869 ntBASIC16.19■□□□□ 0.18
CDH11P55287 PCED1CP-201ENST00000419887 785 ntBASIC16.19■□□□□ 0.18
CDH11P55287 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH11P55287 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 AC034232.1-201ENST00000506026 1064 ntBASIC16.19■□□□□ 0.18
CDH11P55287 DUTP2-201ENST00000519164 463 ntBASIC16.19■□□□□ 0.18
CDH11P55287 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH11P55287 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH11P55287 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH11P55287 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
CDH11P55287 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDH11P55287 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDH11P55287 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH11P55287 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDH11P55287 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CDH11P55287 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDH11P55287 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH11P55287 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH11P55287 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDH11P55287 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH11P55287 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH11P55287 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH11P55287 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH11P55287 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH11P55287 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH11P55287 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH11P55287 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH11P55287 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CDH11P55287 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDH11P55287 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDH11P55287 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH11P55287 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 VENTXP5-201ENST00000523979 775 ntBASIC16.18■□□□□ 0.18
CDH11P55287 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH11P55287 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH11P55287 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH11P55287 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH11P55287 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 AL121761.2-201ENST00000598007 1648 ntBASIC16.18■□□□□ 0.18
CDH11P55287 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
CDH11P55287 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDH11P55287 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH11P55287 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CDH11P55287 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH11P55287 AC011676.5-201ENST00000624864 2660 ntBASIC16.18■□□□□ 0.18
CDH11P55287 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CDH11P55287 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDH11P55287 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CDH11P55287 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH11P55287 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH11P55287 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms