Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC4P55056 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.93□□□□□ -0.34
APOC4P55056 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC4P55056 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
APOC4P55056 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.92□□□□□ -0.34
APOC4P55056 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.92□□□□□ -0.34
APOC4P55056 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.92□□□□□ -0.34
APOC4P55056 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.92□□□□□ -0.34
APOC4P55056 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
APOC4P55056 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
APOC4P55056 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 AC003669.1-201ENST00000334569 611 ntBASIC12.92□□□□□ -0.34
APOC4P55056 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.92□□□□□ -0.34
APOC4P55056 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.92□□□□□ -0.34
APOC4P55056 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC4P55056 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC4P55056 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC4P55056 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.92□□□□□ -0.34
APOC4P55056 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC4P55056 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
APOC4P55056 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.92□□□□□ -0.34
APOC4P55056 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC4P55056 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.92□□□□□ -0.34
APOC4P55056 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.92□□□□□ -0.34
APOC4P55056 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.92□□□□□ -0.34
APOC4P55056 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 AC073592.5-201ENST00000624854 528 ntBASIC12.92□□□□□ -0.34
APOC4P55056 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
APOC4P55056 AL022326.1-202ENST00000641533 845 ntBASIC12.92□□□□□ -0.34
APOC4P55056 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 KRT18P55-202ENST00000578578 1546 ntBASIC12.92□□□□□ -0.34
APOC4P55056 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC4P55056 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 HLA-A-201ENST00000376802 1334 ntBASIC12.91□□□□□ -0.34
APOC4P55056 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.91□□□□□ -0.34
APOC4P55056 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 MADD-208ENST00000405573 1823 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
APOC4P55056 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.91□□□□□ -0.34
APOC4P55056 KLF4P1-201ENST00000412782 1185 ntBASIC12.91□□□□□ -0.34
APOC4P55056 AL590627.1-203ENST00000421194 1026 ntBASIC12.91□□□□□ -0.34
APOC4P55056 AL020989.1-201ENST00000422979 469 ntBASIC12.91□□□□□ -0.34
APOC4P55056 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.91□□□□□ -0.34
APOC4P55056 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
APOC4P55056 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 OR7E14P-202ENST00000530490 1290 ntBASIC12.91□□□□□ -0.34
APOC4P55056 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.91□□□□□ -0.34
APOC4P55056 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.91□□□□□ -0.34
APOC4P55056 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 AC120114.3-201ENST00000611923 658 ntBASIC12.91□□□□□ -0.34
APOC4P55056 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 AD001527.2-201ENST00000622994 785 ntBASIC12.91□□□□□ -0.34
APOC4P55056 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
APOC4P55056 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.91□□□□□ -0.34
APOC4P55056 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms