Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.78■□□□□ 0.28
NR1H2P55055 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.78■□□□□ 0.28
NR1H2P55055 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
NR1H2P55055 AC096733.2-201ENST00000609937 1394 ntBASIC16.78■□□□□ 0.28
NR1H2P55055 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H2P55055 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NR1H2P55055 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NR1H2P55055 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NR1H2P55055 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.78■□□□□ 0.28
NR1H2P55055 SLC25A1P2-201ENST00000430693 912 ntBASIC16.78■□□□□ 0.28
NR1H2P55055 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.78■□□□□ 0.28
NR1H2P55055 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.78■□□□□ 0.28
NR1H2P55055 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.78■□□□□ 0.28
NR1H2P55055 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
NR1H2P55055 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
NR1H2P55055 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.78■□□□□ 0.28
NR1H2P55055 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.78■□□□□ 0.28
NR1H2P55055 AC116562.4-202ENST00000641738 218 ntBASIC16.78■□□□□ 0.28
NR1H2P55055 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.78■□□□□ 0.28
NR1H2P55055 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H2P55055 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H2P55055 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
NR1H2P55055 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H2P55055 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H2P55055 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.78■□□□□ 0.28
NR1H2P55055 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H2P55055 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H2P55055 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.78■□□□□ 0.28
NR1H2P55055 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NR1H2P55055 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
NR1H2P55055 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H2P55055 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.78■□□□□ 0.28
NR1H2P55055 AC073508.3-201ENST00000619697 1419 ntBASIC16.78■□□□□ 0.28
NR1H2P55055 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
NR1H2P55055 AC068418.2-201ENST00000577309 3703 ntBASIC16.78■□□□□ 0.28
NR1H2P55055 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.77■□□□□ 0.28
NR1H2P55055 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
NR1H2P55055 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.77■□□□□ 0.28
NR1H2P55055 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 LINC00554-201ENST00000564841 3011 ntBASIC16.77■□□□□ 0.28
NR1H2P55055 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
NR1H2P55055 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.77■□□□□ 0.28
NR1H2P55055 MFAP1P1-201ENST00000442257 1255 ntBASIC16.77■□□□□ 0.28
NR1H2P55055 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.77■□□□□ 0.28
NR1H2P55055 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.77■□□□□ 0.28
NR1H2P55055 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.77■□□□□ 0.28
NR1H2P55055 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.77■□□□□ 0.28
NR1H2P55055 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NR1H2P55055 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR1H2P55055 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NR1H2P55055 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
NR1H2P55055 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NR1H2P55055 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
NR1H2P55055 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NR1H2P55055 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.77■□□□□ 0.27
NR1H2P55055 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NR1H2P55055 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NR1H2P55055 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NR1H2P55055 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.76■□□□□ 0.27
NR1H2P55055 KRT18P55-202ENST00000578578 1546 ntBASIC16.76■□□□□ 0.27
NR1H2P55055 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.76■□□□□ 0.27
NR1H2P55055 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.76■□□□□ 0.27
NR1H2P55055 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.76■□□□□ 0.27
NR1H2P55055 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.76■□□□□ 0.27
NR1H2P55055 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.76■□□□□ 0.27
NR1H2P55055 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.76■□□□□ 0.27
NR1H2P55055 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.76■□□□□ 0.27
NR1H2P55055 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NR1H2P55055 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.76■□□□□ 0.27
NR1H2P55055 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.76■□□□□ 0.27
NR1H2P55055 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.76■□□□□ 0.27
NR1H2P55055 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.76■□□□□ 0.27
NR1H2P55055 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.76■□□□□ 0.27
NR1H2P55055 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NR1H2P55055 AL160286.2-201ENST00000567150 934 ntBASIC16.76■□□□□ 0.27
NR1H2P55055 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms