Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAD23BP54727 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
RAD23BP54727 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAD23BP54727 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.86■□□□□ 0.61
RAD23BP54727 RCN1P2-201ENST00000398357 915 ntBASIC18.86■□□□□ 0.61
RAD23BP54727 KRT18P56-201ENST00000507275 550 ntBASIC18.86■□□□□ 0.61
RAD23BP54727 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.86■□□□□ 0.61
RAD23BP54727 AC096582.2-201ENST00000510860 516 ntBASIC18.86■□□□□ 0.61
RAD23BP54727 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.86■□□□□ 0.61
RAD23BP54727 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.86■□□□□ 0.61
RAD23BP54727 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.86■□□□□ 0.61
RAD23BP54727 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
RAD23BP54727 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.86■□□□□ 0.61
RAD23BP54727 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAD23BP54727 AL355312.1-201ENST00000407115 2176 ntBASIC18.86■□□□□ 0.61
RAD23BP54727 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RAD23BP54727 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAD23BP54727 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAD23BP54727 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAD23BP54727 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAD23BP54727 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAD23BP54727 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAD23BP54727 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAD23BP54727 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAD23BP54727 NUS1P1-201ENST00000446295 882 ntBASIC18.85■□□□□ 0.61
RAD23BP54727 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.85■□□□□ 0.61
RAD23BP54727 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.85■□□□□ 0.61
RAD23BP54727 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAD23BP54727 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.85■□□□□ 0.61
RAD23BP54727 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAD23BP54727 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAD23BP54727 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
RAD23BP54727 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAD23BP54727 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
RAD23BP54727 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.84■□□□□ 0.61
RAD23BP54727 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 LINC00304-203ENST00000565008 1864 ntBASIC18.84■□□□□ 0.61
RAD23BP54727 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.84■□□□□ 0.61
RAD23BP54727 FAM220CP-201ENST00000395253 831 ntBASIC18.84■□□□□ 0.61
RAD23BP54727 POM121L3P-201ENST00000419331 1163 ntBASIC18.84■□□□□ 0.61
RAD23BP54727 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAD23BP54727 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.84■□□□□ 0.61
RAD23BP54727 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.84■□□□□ 0.61
RAD23BP54727 FOSL1P1-201ENST00000511041 816 ntBASIC18.84■□□□□ 0.61
RAD23BP54727 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.84■□□□□ 0.61
RAD23BP54727 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.84■□□□□ 0.61
RAD23BP54727 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 CLEC4GP1-201ENST00000596555 870 ntBASIC18.84■□□□□ 0.61
RAD23BP54727 AC138894.3-201ENST00000603787 634 ntBASIC18.84■□□□□ 0.61
RAD23BP54727 AC114341.1-201ENST00000618070 349 ntBASIC18.84■□□□□ 0.61
RAD23BP54727 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.84■□□□□ 0.61
RAD23BP54727 AC012313.10-201ENST00000623509 926 ntBASIC18.84■□□□□ 0.61
RAD23BP54727 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.84■□□□□ 0.61
RAD23BP54727 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.84■□□□□ 0.61
RAD23BP54727 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RAD23BP54727 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.84■□□□□ 0.61
RAD23BP54727 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAD23BP54727 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 INTS4P1-201ENST00000438455 1935 ntBASIC18.84■□□□□ 0.61
RAD23BP54727 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.84■□□□□ 0.61
RAD23BP54727 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAD23BP54727 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RAD23BP54727 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.83■□□□□ 0.61
RAD23BP54727 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
RAD23BP54727 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAD23BP54727 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RAD23BP54727 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAD23BP54727 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.83■□□□□ 0.6
RAD23BP54727 AC122714.2-201ENST00000502787 707 ntBASIC18.83■□□□□ 0.6
RAD23BP54727 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms