Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.39■□□□□ 0.69
PMS1P54277 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.39■□□□□ 0.69
PMS1P54277 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.39■□□□□ 0.69
PMS1P54277 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.39■□□□□ 0.69
PMS1P54277 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.39■□□□□ 0.69
PMS1P54277 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.39■□□□□ 0.69
PMS1P54277 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.39■□□□□ 0.69
PMS1P54277 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.39■□□□□ 0.69
PMS1P54277 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
PMS1P54277 AC019129.2-201ENST00000609837 1235 ntBASIC19.39■□□□□ 0.69
PMS1P54277 AL139327.4-201ENST00000612362 153 ntBASIC19.39■□□□□ 0.69
PMS1P54277 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.39■□□□□ 0.69
PMS1P54277 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PMS1P54277 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.39■□□□□ 0.69
PMS1P54277 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS1P54277 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.39■□□□□ 0.69
PMS1P54277 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PMS1P54277 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS1P54277 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS1P54277 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS1P54277 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS1P54277 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS1P54277 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.38■□□□□ 0.69
PMS1P54277 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS1P54277 AC125634.1-201ENST00000438758 1403 ntBASIC19.38■□□□□ 0.69
PMS1P54277 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PMS1P54277 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.38■□□□□ 0.69
PMS1P54277 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.38■□□□□ 0.69
PMS1P54277 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.38■□□□□ 0.69
PMS1P54277 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS1P54277 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
PMS1P54277 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.38■□□□□ 0.69
PMS1P54277 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.38■□□□□ 0.69
PMS1P54277 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.38■□□□□ 0.69
PMS1P54277 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS1P54277 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.38■□□□□ 0.69
PMS1P54277 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PMS1P54277 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
PMS1P54277 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS1P54277 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS1P54277 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS1P54277 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PMS1P54277 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS1P54277 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS1P54277 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PMS1P54277 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.37■□□□□ 0.69
PMS1P54277 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.37■□□□□ 0.69
PMS1P54277 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PMS1P54277 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.37■□□□□ 0.69
PMS1P54277 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.37■□□□□ 0.69
PMS1P54277 AC005332.1-201ENST00000577698 1310 ntBASIC19.37■□□□□ 0.69
PMS1P54277 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 SLC25A1P3-201ENST00000395415 828 ntBASIC19.37■□□□□ 0.69
PMS1P54277 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.37■□□□□ 0.69
PMS1P54277 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.37■□□□□ 0.69
PMS1P54277 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.37■□□□□ 0.69
PMS1P54277 GUSBP12-201ENST00000513727 720 ntBASIC19.37■□□□□ 0.69
PMS1P54277 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PMS1P54277 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.37■□□□□ 0.69
PMS1P54277 LINC01238-205ENST00000567549 1107 ntBASIC19.37■□□□□ 0.69
PMS1P54277 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.37■□□□□ 0.69
PMS1P54277 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.37■□□□□ 0.69
PMS1P54277 AC011676.5-201ENST00000624864 2660 ntBASIC19.37■□□□□ 0.69
PMS1P54277 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.37■□□□□ 0.69
PMS1P54277 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS1P54277 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms