Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1EP49674 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CSNK1EP49674 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CSNK1EP49674 BX276092.7-203ENST00000637198 1536 ntBASIC17.22■□□□□ 0.35
CSNK1EP49674 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CSNK1EP49674 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CSNK1EP49674 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1EP49674 AC135776.1-201ENST00000319817 2481 ntBASIC17.22■□□□□ 0.35
CSNK1EP49674 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CSNK1EP49674 ELL2P1-201ENST00000413990 1906 ntBASIC17.22■□□□□ 0.35
CSNK1EP49674 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1EP49674 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CSNK1EP49674 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1EP49674 MKNK2P1-201ENST00000437526 628 ntBASIC17.22■□□□□ 0.35
CSNK1EP49674 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.22■□□□□ 0.35
CSNK1EP49674 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.22■□□□□ 0.35
CSNK1EP49674 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1EP49674 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1EP49674 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1EP49674 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1EP49674 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1EP49674 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1EP49674 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1EP49674 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1EP49674 BCAR1-209ENST00000546196 1340 ntBASIC17.21■□□□□ 0.35
CSNK1EP49674 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CSNK1EP49674 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CSNK1EP49674 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CSNK1EP49674 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CSNK1EP49674 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.21■□□□□ 0.35
CSNK1EP49674 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1EP49674 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.21■□□□□ 0.35
CSNK1EP49674 RFPL4AP1-201ENST00000530883 850 ntBASIC17.21■□□□□ 0.35
CSNK1EP49674 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.21■□□□□ 0.35
CSNK1EP49674 AC010507.1-201ENST00000633895 436 ntBASIC17.21■□□□□ 0.35
CSNK1EP49674 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CSNK1EP49674 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1EP49674 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1EP49674 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CSNK1EP49674 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CSNK1EP49674 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.21■□□□□ 0.34
CSNK1EP49674 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CSNK1EP49674 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.21■□□□□ 0.34
CSNK1EP49674 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CSNK1EP49674 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CSNK1EP49674 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.21■□□□□ 0.34
CSNK1EP49674 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CSNK1EP49674 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.2■□□□□ 0.34
CSNK1EP49674 AC009336.1-201ENST00000608941 1553 ntBASIC17.2■□□□□ 0.34
CSNK1EP49674 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.2■□□□□ 0.34
CSNK1EP49674 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.2■□□□□ 0.34
CSNK1EP49674 CYMP-203ENST00000474680 1263 ntBASIC17.2■□□□□ 0.34
CSNK1EP49674 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.2■□□□□ 0.34
CSNK1EP49674 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1EP49674 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1EP49674 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.2■□□□□ 0.34
CSNK1EP49674 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1EP49674 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.2■□□□□ 0.34
CSNK1EP49674 WIZP1-201ENST00000531444 2299 ntBASIC17.2■□□□□ 0.34
CSNK1EP49674 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CSNK1EP49674 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CSNK1EP49674 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1EP49674 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1EP49674 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1EP49674 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1EP49674 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1EP49674 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1EP49674 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms