Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT6CP48668 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
KRT6CP48668 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
KRT6CP48668 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KRT6CP48668 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT6CP48668 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 HBZP1-201ENST00000354915 429 ntBASIC17.13■□□□□ 0.33
KRT6CP48668 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 AK4P3-201ENST00000418260 669 ntBASIC17.13■□□□□ 0.33
KRT6CP48668 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KRT6CP48668 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 KRT18P57-201ENST00000443599 1254 ntBASIC17.13■□□□□ 0.33
KRT6CP48668 AC092647.4-201ENST00000457211 535 ntBASIC17.13■□□□□ 0.33
KRT6CP48668 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
KRT6CP48668 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT6CP48668 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT6CP48668 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT6CP48668 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
KRT6CP48668 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
KRT6CP48668 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT6CP48668 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KRT6CP48668 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT6CP48668 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6CP48668 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT6CP48668 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT6CP48668 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT6CP48668 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
KRT6CP48668 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
KRT6CP48668 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT6CP48668 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT6CP48668 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT6CP48668 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT6CP48668 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT6CP48668 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT6CP48668 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.12■□□□□ 0.33
KRT6CP48668 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT6CP48668 LINC01023-201ENST00000606054 436 ntBASIC17.12■□□□□ 0.33
KRT6CP48668 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KRT6CP48668 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT6CP48668 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT6CP48668 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
KRT6CP48668 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
KRT6CP48668 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KRT6CP48668 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT6CP48668 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT6CP48668 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 MTCL1P1-201ENST00000446207 792 ntBASIC17.11■□□□□ 0.33
KRT6CP48668 AC112907.2-201ENST00000448639 330 ntBASIC17.11■□□□□ 0.33
KRT6CP48668 KRT18P38-201ENST00000449496 1282 ntBASIC17.11■□□□□ 0.33
KRT6CP48668 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT6CP48668 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT6CP48668 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
KRT6CP48668 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT6CP48668 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.11■□□□□ 0.33
KRT6CP48668 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT6CP48668 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.11■□□□□ 0.33
KRT6CP48668 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT6CP48668 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms