Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.94■□□□□ 0.78
TM4SF4P48230 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
TM4SF4P48230 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF4P48230 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.94■□□□□ 0.78
TM4SF4P48230 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF4P48230 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.94■□□□□ 0.78
TM4SF4P48230 MRPS18AP1-201ENST00000414458 589 ntBASIC19.94■□□□□ 0.78
TM4SF4P48230 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.94■□□□□ 0.78
TM4SF4P48230 AC087163.2-201ENST00000457299 853 ntBASIC19.94■□□□□ 0.78
TM4SF4P48230 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF4P48230 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF4P48230 IGHV3-62-201ENST00000520057 340 ntBASIC19.94■□□□□ 0.78
TM4SF4P48230 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.94■□□□□ 0.78
TM4SF4P48230 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF4P48230 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.94■□□□□ 0.78
TM4SF4P48230 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.94■□□□□ 0.78
TM4SF4P48230 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF4P48230 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF4P48230 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF4P48230 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF4P48230 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF4P48230 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TM4SF4P48230 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF4P48230 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.93■□□□□ 0.78
TM4SF4P48230 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF4P48230 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF4P48230 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF4P48230 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
TM4SF4P48230 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF4P48230 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF4P48230 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF4P48230 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TM4SF4P48230 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF4P48230 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF4P48230 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TM4SF4P48230 ARSEP1-201ENST00000420443 635 ntBASIC19.93■□□□□ 0.78
TM4SF4P48230 ATP5G2P4-201ENST00000442175 420 ntBASIC19.93■□□□□ 0.78
TM4SF4P48230 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TM4SF4P48230 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.93■□□□□ 0.78
TM4SF4P48230 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF4P48230 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF4P48230 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.93■□□□□ 0.78
TM4SF4P48230 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
TM4SF4P48230 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TM4SF4P48230 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF4P48230 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
TM4SF4P48230 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF4P48230 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
TM4SF4P48230 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TM4SF4P48230 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.92■□□□□ 0.78
TM4SF4P48230 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF4P48230 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF4P48230 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.92■□□□□ 0.78
TM4SF4P48230 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.92■□□□□ 0.78
TM4SF4P48230 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.92■□□□□ 0.78
TM4SF4P48230 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.92■□□□□ 0.78
TM4SF4P48230 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.92■□□□□ 0.78
TM4SF4P48230 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.92■□□□□ 0.78
TM4SF4P48230 AC009118.2-201ENST00000613275 655 ntBASIC19.92■□□□□ 0.78
TM4SF4P48230 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.92■□□□□ 0.78
TM4SF4P48230 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF4P48230 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF4P48230 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
TM4SF4P48230 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF4P48230 UXT-AS1-201ENST00000590504 1525 ntBASIC19.92■□□□□ 0.78
TM4SF4P48230 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.91■□□□□ 0.78
TM4SF4P48230 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF4P48230 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF4P48230 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TM4SF4P48230 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF4P48230 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF4P48230 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF4P48230 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF4P48230 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF4P48230 AC241585.1-201ENST00000433527 519 ntBASIC19.91■□□□□ 0.78
TM4SF4P48230 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.91■□□□□ 0.78
TM4SF4P48230 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF4P48230 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.91■□□□□ 0.78
TM4SF4P48230 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TM4SF4P48230 MIR4515-201ENST00000584082 81 ntBASIC19.91■□□□□ 0.78
TM4SF4P48230 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.91■□□□□ 0.78
TM4SF4P48230 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.91■□□□□ 0.78
TM4SF4P48230 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.91■□□□□ 0.78
TM4SF4P48230 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF4P48230 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF4P48230 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.91■□□□□ 0.78
TM4SF4P48230 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TM4SF4P48230 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.91■□□□□ 0.78
TM4SF4P48230 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.91■□□□□ 0.78
TM4SF4P48230 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TM4SF4P48230 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TM4SF4P48230 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF4P48230 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.9■□□□□ 0.78
TM4SF4P48230 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF4P48230 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.9■□□□□ 0.78
TM4SF4P48230 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF4P48230 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF4P48230 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF4P48230 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TM4SF4P48230 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms