Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
KRT9P35527 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
KRT9P35527 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT9P35527 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
KRT9P35527 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.32■□□□□ 0.68
KRT9P35527 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT9P35527 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
KRT9P35527 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT9P35527 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
KRT9P35527 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
KRT9P35527 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT9P35527 AL391807.1-203ENST00000604392 2365 ntBASIC19.32■□□□□ 0.68
KRT9P35527 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT9P35527 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT9P35527 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.31■□□□□ 0.68
KRT9P35527 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT9P35527 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 SPDYE15P-201ENST00000424157 909 ntBASIC19.31■□□□□ 0.68
KRT9P35527 HOMER2P1-201ENST00000455653 964 ntBASIC19.31■□□□□ 0.68
KRT9P35527 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT9P35527 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.31■□□□□ 0.68
KRT9P35527 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.31■□□□□ 0.68
KRT9P35527 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.31■□□□□ 0.68
KRT9P35527 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT9P35527 AL136038.4-201ENST00000603606 1261 ntBASIC19.31■□□□□ 0.68
KRT9P35527 AC006011.2-201ENST00000621313 1158 ntBASIC19.31■□□□□ 0.68
KRT9P35527 AC079602.3-201ENST00000623931 403 ntBASIC19.31■□□□□ 0.68
KRT9P35527 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
KRT9P35527 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT9P35527 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT9P35527 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
KRT9P35527 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT9P35527 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT9P35527 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
KRT9P35527 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
KRT9P35527 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
KRT9P35527 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT9P35527 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 FAM8A6P-201ENST00000407496 1135 ntBASIC19.3■□□□□ 0.68
KRT9P35527 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
KRT9P35527 DDX43P3-201ENST00000441064 443 ntBASIC19.3■□□□□ 0.68
KRT9P35527 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT9P35527 AC113404.2-201ENST00000507884 177 ntBASIC19.3■□□□□ 0.68
KRT9P35527 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT9P35527 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT9P35527 AC024563.2-201ENST00000603282 481 ntBASIC19.3■□□□□ 0.68
KRT9P35527 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
KRT9P35527 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
KRT9P35527 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
KRT9P35527 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT9P35527 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
KRT9P35527 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT9P35527 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms