Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.19■□□□□ 0.34
EPHA3P29320 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.19■□□□□ 0.34
EPHA3P29320 LYSMD4-203ENST00000378904 2122 ntBASIC17.19■□□□□ 0.34
EPHA3P29320 PVRIG2P-201ENST00000435460 978 ntBASIC17.19■□□□□ 0.34
EPHA3P29320 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.19■□□□□ 0.34
EPHA3P29320 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA3P29320 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
EPHA3P29320 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.19■□□□□ 0.34
EPHA3P29320 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHA3P29320 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.19■□□□□ 0.34
EPHA3P29320 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.19■□□□□ 0.34
EPHA3P29320 AC092865.7-201ENST00000641832 219 ntBASIC17.19■□□□□ 0.34
EPHA3P29320 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.19■□□□□ 0.34
EPHA3P29320 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA3P29320 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHA3P29320 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA3P29320 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA3P29320 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA3P29320 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA3P29320 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
EPHA3P29320 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.18■□□□□ 0.34
EPHA3P29320 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
EPHA3P29320 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.18■□□□□ 0.34
EPHA3P29320 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.18■□□□□ 0.34
EPHA3P29320 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
EPHA3P29320 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.18■□□□□ 0.34
EPHA3P29320 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
EPHA3P29320 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
EPHA3P29320 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.18■□□□□ 0.34
EPHA3P29320 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.18■□□□□ 0.34
EPHA3P29320 TSPY7P-201ENST00000431358 1114 ntBASIC17.18■□□□□ 0.34
EPHA3P29320 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.18■□□□□ 0.34
EPHA3P29320 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.18■□□□□ 0.34
EPHA3P29320 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
EPHA3P29320 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.18■□□□□ 0.34
EPHA3P29320 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.18■□□□□ 0.34
EPHA3P29320 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.18■□□□□ 0.34
EPHA3P29320 AL157888.1-201ENST00000631930 593 ntBASIC17.18■□□□□ 0.34
EPHA3P29320 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.18■□□□□ 0.34
EPHA3P29320 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.18■□□□□ 0.34
EPHA3P29320 CICP6-201ENST00000457191 2729 ntBASIC17.18■□□□□ 0.34
EPHA3P29320 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA3P29320 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.18■□□□□ 0.34
EPHA3P29320 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
EPHA3P29320 FLJ38576-201ENST00000623820 2459 ntBASIC17.18■□□□□ 0.34
EPHA3P29320 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.17■□□□□ 0.34
EPHA3P29320 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
EPHA3P29320 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHA3P29320 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHA3P29320 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
EPHA3P29320 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHA3P29320 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EPHA3P29320 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHA3P29320 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHA3P29320 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHA3P29320 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHA3P29320 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EPHA3P29320 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EPHA3P29320 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.17■□□□□ 0.34
EPHA3P29320 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.17■□□□□ 0.34
EPHA3P29320 AC113404.2-201ENST00000507884 177 ntBASIC17.17■□□□□ 0.34
EPHA3P29320 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
EPHA3P29320 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
EPHA3P29320 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
EPHA3P29320 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.17■□□□□ 0.34
EPHA3P29320 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
EPHA3P29320 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
EPHA3P29320 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EPHA3P29320 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EPHA3P29320 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.17■□□□□ 0.34
EPHA3P29320 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EPHA3P29320 PCDH8P1-201ENST00000428983 2773 ntBASIC17.17■□□□□ 0.34
EPHA3P29320 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
EPHA3P29320 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.16■□□□□ 0.34
EPHA3P29320 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms