Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.26■□□□□ 0.99
CHMLP26374 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CHMLP26374 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMLP26374 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.26■□□□□ 0.99
CHMLP26374 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMLP26374 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.26■□□□□ 0.99
CHMLP26374 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CHMLP26374 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CHMLP26374 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CHMLP26374 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.25■□□□□ 0.99
CHMLP26374 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.25■□□□□ 0.99
CHMLP26374 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.25■□□□□ 0.99
CHMLP26374 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.25■□□□□ 0.99
CHMLP26374 AC016396.2-201ENST00000562575 1417 ntBASIC21.25■□□□□ 0.99
CHMLP26374 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.25■□□□□ 0.99
CHMLP26374 AL445228.2-201ENST00000605589 952 ntBASIC21.25■□□□□ 0.99
CHMLP26374 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
CHMLP26374 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CHMLP26374 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.25■□□□□ 0.99
CHMLP26374 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
CHMLP26374 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHMLP26374 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMLP26374 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMLP26374 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMLP26374 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.24■□□□□ 0.99
CHMLP26374 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMLP26374 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMLP26374 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.24■□□□□ 0.99
CHMLP26374 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMLP26374 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMLP26374 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.24■□□□□ 0.99
CHMLP26374 FAM220CP-201ENST00000395253 831 ntBASIC21.24■□□□□ 0.99
CHMLP26374 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHMLP26374 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.24■□□□□ 0.99
CHMLP26374 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.24■□□□□ 0.99
CHMLP26374 NPAP1P7-201ENST00000613027 823 ntBASIC21.24■□□□□ 0.99
CHMLP26374 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHMLP26374 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMLP26374 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.24■□□□□ 0.99
CHMLP26374 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMLP26374 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMLP26374 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMLP26374 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHMLP26374 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.24■□□□□ 0.99
CHMLP26374 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CHMLP26374 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21.23■□□□□ 0.99
CHMLP26374 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 AC022211.2-201ENST00000585075 2527 ntBASIC21.23■□□□□ 0.99
CHMLP26374 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.23■□□□□ 0.99
CHMLP26374 KRT8P10-201ENST00000450021 1447 ntBASIC21.23■□□□□ 0.99
CHMLP26374 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CHMLP26374 SLC25A1P3-201ENST00000395415 828 ntBASIC21.23■□□□□ 0.99
CHMLP26374 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.23■□□□□ 0.99
CHMLP26374 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.23■□□□□ 0.99
CHMLP26374 AC009533.2-201ENST00000543664 586 ntBASIC21.23■□□□□ 0.99
CHMLP26374 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.23■□□□□ 0.99
CHMLP26374 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.23■□□□□ 0.99
CHMLP26374 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.23■□□□□ 0.99
CHMLP26374 AC011467.2-201ENST00000598425 242 ntBASIC21.23■□□□□ 0.99
CHMLP26374 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CHMLP26374 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CHMLP26374 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CHMLP26374 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.23■□□□□ 0.99
CHMLP26374 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMLP26374 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHMLP26374 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMLP26374 AC116353.5-201ENST00000638148 1699 ntBASIC21.22■□□□□ 0.99
CHMLP26374 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CHMLP26374 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CHMLP26374 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMLP26374 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.22■□□□□ 0.99
CHMLP26374 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHMLP26374 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms