Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC132938.5-201ENST00000624980 1813 ntBASIC15.2■□□□□ 0.02
CD40P25942 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CD40P25942 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.2■□□□□ 0.02
CD40P25942 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.2■□□□□ 0.02
CD40P25942 KLF4P1-201ENST00000412782 1185 ntBASIC15.2■□□□□ 0.02
CD40P25942 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.2■□□□□ 0.02
CD40P25942 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.2■□□□□ 0.02
CD40P25942 AL020989.1-201ENST00000422979 469 ntBASIC15.2■□□□□ 0.02
CD40P25942 PRYP5-201ENST00000451909 266 ntBASIC15.2■□□□□ 0.02
CD40P25942 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.2■□□□□ 0.02
CD40P25942 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.2■□□□□ 0.02
CD40P25942 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.2■□□□□ 0.02
CD40P25942 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.2■□□□□ 0.02
CD40P25942 AC116407.3-201ENST00000623905 1129 ntBASIC15.2■□□□□ 0.02
CD40P25942 AC107918.4-202ENST00000641623 219 ntBASIC15.2■□□□□ 0.02
CD40P25942 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CD40P25942 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.2■□□□□ 0.02
CD40P25942 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CD40P25942 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CD40P25942 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.19■□□□□ 0.02
CD40P25942 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.19■□□□□ 0.02
CD40P25942 AC004817.3-201ENST00000602957 2129 ntBASIC15.19■□□□□ 0.02
CD40P25942 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.19■□□□□ 0.02
CD40P25942 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CD40P25942 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 AC003669.1-201ENST00000334569 611 ntBASIC15.19■□□□□ 0.02
CD40P25942 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.19■□□□□ 0.02
CD40P25942 LAGE3P1-201ENST00000425356 484 ntBASIC15.19■□□□□ 0.02
CD40P25942 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.19■□□□□ 0.02
CD40P25942 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.19■□□□□ 0.02
CD40P25942 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.19■□□□□ 0.02
CD40P25942 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.19■□□□□ 0.02
CD40P25942 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.19■□□□□ 0.02
CD40P25942 AC008735.5-201ENST00000623544 497 ntBASIC15.19■□□□□ 0.02
CD40P25942 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.19■□□□□ 0.02
CD40P25942 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.19■□□□□ 0.02
CD40P25942 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CD40P25942 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.19■□□□□ 0.02
CD40P25942 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.19■□□□□ 0.02
CD40P25942 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CD40P25942 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.19■□□□□ 0.02
CD40P25942 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD40P25942 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CD40P25942 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.18■□□□□ 0.02
CD40P25942 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CD40P25942 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.18■□□□□ 0.02
CD40P25942 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CD40P25942 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CD40P25942 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CD40P25942 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.18■□□□□ 0.02
CD40P25942 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CD40P25942 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD40P25942 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.18■□□□□ 0.02
CD40P25942 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.18■□□□□ 0.02
CD40P25942 AC002558.1-201ENST00000488906 803 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms