Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCND1P24385 AC005521.1-201ENST00000393351 872 ntBASIC17.81■□□□□ 0.44
CCND1P24385 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCND1P24385 MIR3917-201ENST00000580971 93 ntBASIC17.81■□□□□ 0.44
CCND1P24385 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCND1P24385 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCND1P24385 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCND1P24385 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCND1P24385 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.81■□□□□ 0.44
CCND1P24385 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCND1P24385 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.81■□□□□ 0.44
CCND1P24385 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCND1P24385 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCND1P24385 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.81■□□□□ 0.44
CCND1P24385 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.81■□□□□ 0.44
CCND1P24385 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCND1P24385 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCND1P24385 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCND1P24385 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.81■□□□□ 0.44
CCND1P24385 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCND1P24385 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCND1P24385 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.8■□□□□ 0.44
CCND1P24385 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCND1P24385 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCND1P24385 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.8■□□□□ 0.44
CCND1P24385 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.8■□□□□ 0.44
CCND1P24385 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCND1P24385 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCND1P24385 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCND1P24385 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCND1P24385 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.8■□□□□ 0.44
CCND1P24385 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.8■□□□□ 0.44
CCND1P24385 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCND1P24385 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.8■□□□□ 0.44
CCND1P24385 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.8■□□□□ 0.44
CCND1P24385 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.8■□□□□ 0.44
CCND1P24385 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.8■□□□□ 0.44
CCND1P24385 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCND1P24385 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
CCND1P24385 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCND1P24385 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCND1P24385 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
CCND1P24385 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCND1P24385 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCND1P24385 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.79■□□□□ 0.44
CCND1P24385 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CCND1P24385 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.79■□□□□ 0.44
CCND1P24385 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCND1P24385 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.79■□□□□ 0.44
CCND1P24385 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.79■□□□□ 0.44
CCND1P24385 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCND1P24385 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CCND1P24385 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.79■□□□□ 0.44
CCND1P24385 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.79■□□□□ 0.44
CCND1P24385 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.79■□□□□ 0.44
CCND1P24385 AC008687.5-201ENST00000593746 558 ntBASIC17.79■□□□□ 0.44
CCND1P24385 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CCND1P24385 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.79■□□□□ 0.44
CCND1P24385 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCND1P24385 GMCL1P1-201ENST00000463439 1581 ntBASIC17.79■□□□□ 0.44
CCND1P24385 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.78■□□□□ 0.44
CCND1P24385 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCND1P24385 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 SDHAP2-201ENST00000455183 2001 ntBASIC17.78■□□□□ 0.44
CCND1P24385 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CCND1P24385 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.78■□□□□ 0.44
CCND1P24385 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.78■□□□□ 0.44
CCND1P24385 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.78■□□□□ 0.44
CCND1P24385 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.78■□□□□ 0.44
CCND1P24385 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCND1P24385 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms