Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.96■□□□□ 0.46
NFKB1P19838 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.96■□□□□ 0.46
NFKB1P19838 CROCCP2-202ENST00000412962 2773 ntBASIC17.96■□□□□ 0.46
NFKB1P19838 AC108860.2-201ENST00000562760 2183 ntBASIC17.96■□□□□ 0.46
NFKB1P19838 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 AC106820.2-201ENST00000563775 3264 ntBASIC17.95■□□□□ 0.46
NFKB1P19838 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 SIRPAP1-201ENST00000448467 1770 ntBASIC17.95■□□□□ 0.46
NFKB1P19838 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 AC246785.2-201ENST00000432512 513 ntBASIC17.95■□□□□ 0.46
NFKB1P19838 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.95■□□□□ 0.46
NFKB1P19838 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.95■□□□□ 0.46
NFKB1P19838 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.95■□□□□ 0.46
NFKB1P19838 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.95■□□□□ 0.46
NFKB1P19838 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NFKB1P19838 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NFKB1P19838 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.94■□□□□ 0.46
NFKB1P19838 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NFKB1P19838 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.94■□□□□ 0.46
NFKB1P19838 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NFKB1P19838 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.94■□□□□ 0.46
NFKB1P19838 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.94■□□□□ 0.46
NFKB1P19838 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.94■□□□□ 0.46
NFKB1P19838 TPSP2-201ENST00000561760 610 ntBASIC17.94■□□□□ 0.46
NFKB1P19838 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NFKB1P19838 AP002414.4-201ENST00000589764 1148 ntBASIC17.94■□□□□ 0.46
NFKB1P19838 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NFKB1P19838 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NFKB1P19838 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NFKB1P19838 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NFKB1P19838 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
NFKB1P19838 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.94■□□□□ 0.46
NFKB1P19838 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NFKB1P19838 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.94■□□□□ 0.46
NFKB1P19838 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.94■□□□□ 0.46
NFKB1P19838 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NFKB1P19838 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.93■□□□□ 0.46
NFKB1P19838 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NFKB1P19838 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
NFKB1P19838 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.93■□□□□ 0.46
NFKB1P19838 VENTXP7-201ENST00000475503 772 ntBASIC17.93■□□□□ 0.46
NFKB1P19838 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.93■□□□□ 0.46
NFKB1P19838 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.93■□□□□ 0.46
NFKB1P19838 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.93■□□□□ 0.46
NFKB1P19838 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.93■□□□□ 0.46
NFKB1P19838 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.93■□□□□ 0.46
NFKB1P19838 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NFKB1P19838 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.93■□□□□ 0.46
NFKB1P19838 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.93■□□□□ 0.46
NFKB1P19838 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.93■□□□□ 0.46
NFKB1P19838 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
NFKB1P19838 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.93■□□□□ 0.46
NFKB1P19838 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NFKB1P19838 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.92■□□□□ 0.46
NFKB1P19838 AC233702.3-201ENST00000578656 1387 ntBASIC17.92■□□□□ 0.46
NFKB1P19838 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NFKB1P19838 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NFKB1P19838 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms